Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0509 ATGGCGAGAGTGAAGCACACGCCAGCTTCTCGCAAATCCGCTAAAAAGCAAGCGCCACGCGCATCCACTTCCACGCAGCCGCCACCACAATCCCAATCGCCTGCAACTAGAGAGAGGAGGAGAGCTCAACAAGTGGAGCCGCAGCAGGAGCCTGAGGCTCAGGGAAGGAAGAAGAGGCGCAATAGGTCGGGAACTGTGGCGCTTCGTGAGATTCGGCATTTTCAGAGGAGTTGTGAGCTTCTCATCCCGGCTGCTCCCTTTATCAGATGTGTCAAACAGATTACAAATCAATTCTCTACGGAGGTGTCTCGTTGGACACCTGAAGCTGTGGTAGCACTTCAAGAGGCAGCTGAGGAATATCTGGTTCACTTATTTGAAGATGGAATGCTCTGTGCAATTCATGCAAGGCGTATTACTCTTATGAAAAAGGACATTGAGTTGGCCCGGAGGCTTGGAGGAATAGGAAGGCCTTGGTGA 477 0.5178 MARVKHTPASRKSAKKQAPRASTSTQPPPQSQSPATRERRRAQQVEPQQEPEAQGRKKRRNRSGTVALREIRHFQRSCELLIPAAPFIRCVKQITNQFSTEVSRWTPEAVVALQEAAEEYLVHLFEDGMLCAIHARRITLMKKDIELARRLGGIGRPW* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0509 158 SMART h35 53 156 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso7g0509 158 Gene3D Histone, subunit A 2 154 IPR009072 GO:0046982
Gso7g0509 158 PRINTS Histone H3 signature 14 28 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso7g0509 158 PRINTS Histone H3 signature 77 94 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso7g0509 158 PRINTS Histone H3 signature 118 134 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso7g0509 158 PRINTS Histone H3 signature 134 155 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso7g0509 158 MobiDBLite consensus disorder prediction 16 38 - -
Gso7g0509 158 MobiDBLite consensus disorder prediction 39 64 - -
Gso7g0509 158 MobiDBLite consensus disorder prediction 1 64 - -
Gso7g0509 158 SUPERFAMILY Histone-fold 26 154 IPR009072 GO:0046982
Gso7g0509 158 PANTHER HISTONE H3 9 158 IPR000164 GO:0000786|GO:0003677|GO:0030527
Gso7g0509 158 Pfam Core histone H2A/H2B/H3/H4 31 151 IPR007125 GO:0003677
Gso7g0509 158 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 9 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0509 Gso-Chr7 5134541 5139358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0509 K11253 - gmx:100811872 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0509 7 5134541 5139358 Gso7g0509 7 5134541 5139358 ECH
Gso7g0509 7 5134541 5139358 Gso16g0217 16 2533487 2537167 GST