Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0482 ATGGCCAACTTAATCACCTTGTTTTCGCTGTGGTTGAGTATGATGTCTACTATCTACAGTGTGAAGCTTATAGCAAATGGAAGTACTAAGGGAGAATCCACAAGGTTCTATGATTTCAAGGTTCAAACTAAAAGAGTTACCAAACTTTGCAACTCCAAAGACATTGTTACAATTAATGGTATGTTTCCAGGACCTGTTGTTTACGCCCAAGAAGATGATAGAATCATAGTAAAAGTGACCAATATGACACCTTTCAATGTTACAATTCACTGGCACGGTGTCCGGCAAAGGCTATCATGCTGGTATGATGGGGCATCCTTGATTACACAATGTCCAATTCAATCAGGCCAAAGTTTCACCTATAATTTTACAGTGGTGCAGCAGAAGGGCACCTTCTTCTGGCATGCTCATATTTCTTGGTTAAGAGGAACAGTTTATGGTGCCATGATTGTTTATCCAAAGACAGGAGTACCATACCCATTTAACTTTCCCTATCAAGAGCACATAATTATACTAGGGGAGTATTGGCTGCAGGATCTCCAACAAATTGAGAATGCCACTATAGCAAGTGGAGGACCTCCTCCTATAGCAGATGCATATACCATTAACGGTCATCCAGGACCTAACTACAACTGCTCCACTAATGATGTCTACCAAATCAATGTGATTCCGGGGAAGATCTATTTGTTAAGACTGATTAATGCTGGTTTGAACACTGAGAACTTCTTTTCCATTGCTTATCACAATTTAACAATCGTGGAAGCTGATGCAGAATACACAAAGCCATTCACCACAGACACAGTAATGATTGGACCTGGTCAAACACTGAATGTCCTTCTCTCTGCAGATCAACCAATAGGAAAATACTCCATGGCTATAACACCTTACAAGTCTGGAAGGTTTGTCAAATATCAAAACATTTCGGCTATAGCCTACTTCAACTACATAGGCACTTCATCTGATAGCTTACCTTTACCAGCTAAATTGCCTAAACTAGATGATAAATTGGCTGTCAAGACAGTCATGGACGGATTAAGGAGCCTAAATCAAGTCAATGTTTTCAAAGAAATTGACAAAAATCTATTCGTCACCATTGGATTGAATGTTCAAAAGTGTCATTCAAAGAAACCAAAGCAAAACTGCCAATTCATGCACAATGGGGTATTAGCAGCTTCAATGAACAATGTAAGTTTTGTTAATCCCAATATTTCAATCCTGGGAGCATATTATAAGAAGATTAAAGGATCATATACTGAAGATTTCCCAGACACCCCCCCAAAGTTCTATGACTTTGTTAATGGTGCCCCTAATAACATTTCATACGACACGCAGTCATTGAATGGTACTAGAACAAAAGTCCTTAAATATGGTAGCAGGGTGCAACTCATTATGCAGGACACAGGGATAGTCAACACTGAAAACCACCCTATGCACTTTCACGGCTACAGCTTTTATGTGGTAGGGTATGGCACAGGCAACTATAACCCACGAACAGCAAAATTCAATTTAGTGGATCCTCCATACATGAACACAATTGGAGTTCCAGCTGGTGGATGGGCAGCAATTCGCTTTGTTGCTGATAATCCAGGGGTGTGGTATATGCACTGTCACATTGATATACACATGCAATGGGGACTAGGAATGGTATTTATAGTAAACAATGGAAAAGGAGAGCTGGAATCCTTACCACATCCTCCACCAGACCTGCCACAATGTTAA 1719 0.4014 MANLITLFSLWLSMMSTIYSVKLIANGSTKGESTRFYDFKVQTKRVTKLCNSKDIVTINGMFPGPVVYAQEDDRIIVKVTNMTPFNVTIHWHGVRQRLSCWYDGASLITQCPIQSGQSFTYNFTVVQQKGTFFWHAHISWLRGTVYGAMIVYPKTGVPYPFNFPYQEHIIILGEYWLQDLQQIENATIASGGPPPIADAYTINGHPGPNYNCSTNDVYQINVIPGKIYLLRLINAGLNTENFFSIAYHNLTIVEADAEYTKPFTTDTVMIGPGQTLNVLLSADQPIGKYSMAITPYKSGRFVKYQNISAIAYFNYIGTSSDSLPLPAKLPKLDDKLAVKTVMDGLRSLNQVNVFKEIDKNLFVTIGLNVQKCHSKKPKQNCQFMHNGVLAASMNNVSFVNPNISILGAYYKKIKGSYTEDFPDTPPKFYDFVNGAPNNISYDTQSLNGTRTKVLKYGSRVQLIMQDTGIVNTENHPMHFHGYSFYVVGYGTGNYNPRTAKFNLVDPPYMNTIGVPAGGWAAIRFVADNPGVWYMHCHIDIHMQWGLGMVFIVNNGKGELESLPHPPPDLPQC* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0482 572 CDD CuRO_3_LCC_plant 417 555 IPR034289 GO:0005507
Gso7g0482 572 SUPERFAMILY Cupredoxins 31 176 IPR008972 -
Gso7g0482 572 Pfam Multicopper oxidase 41 154 IPR011707 GO:0005507
Gso7g0482 572 Gene3D - 164 350 IPR008972 -
Gso7g0482 572 Pfam Multicopper oxidase 167 316 IPR001117 -
Gso7g0482 572 Gene3D - 16 153 IPR008972 -
Gso7g0482 572 PANTHER MULTI-COPPER OXIDASE 14 572 IPR045087 -
Gso7g0482 572 ProSitePatterns Multicopper oxidases signature 1. 530 550 IPR033138 -
Gso7g0482 572 PANTHER LACCASE-6 14 572 - -
Gso7g0482 572 ProSitePatterns Multicopper oxidases signature 2. 535 546 IPR002355 GO:0005507
Gso7g0482 572 CDD CuRO_2_LCC_plant 168 315 IPR034285 -
Gso7g0482 572 CDD CuRO_1_LCC_plant 37 153 IPR034288 GO:0005507
Gso7g0482 572 Pfam Multicopper oxidase 422 555 IPR011706 GO:0005507|GO:0016491
Gso7g0482 572 SUPERFAMILY Cupredoxins 356 572 IPR008972 -
Gso7g0482 572 Gene3D - 372 572 IPR008972 -
Gso7g0482 572 SUPERFAMILY Cupredoxins 164 328 IPR008972 -
Gso7g0482 572 TIGRFAM laccase: laccase 34 572 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0482 Gso-Chr7 4794937 4798088 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0482 K05909 - gmx:100789406 1176.77