Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0423 ATGATCTTAAGTAAAAGAAATGTTTTTGGCACCAAGGGAAAAATGGGTATAGATTTCATGATTTTGGTGTTAACATTGTCATGGTTTTGTCTGACTACTATATGCGTCTCAGCTACAAAACAAGCATACCCACCAACACCACAACCGAACCAGAACCTAAGGTTTGACCAAAATGGAGAATTCAAGATATTGCAGGTGGCAGATATGCACTATGCAAATGGCAAGACCACGCATTGCTTGAATGTGCTCCCTTCCCAGAATTTTTCTTGCTCTGACCTCAACACCACTATCTTTCTTAACAGAATGATCAAAGCGGAGAAACCCAATCTTATTGTCTTCACTGGAGATAATATCTTTGCGTTTGATTCCTCGGATTCAGCTAAATCATTGGATGCTGCATTTGCTCCAGCAATTGCATCAAACATTCCTTGGGTAGCTGTTTTGGGCAACCATGACCAGGAAGGAACCCTCTCTAGGTCAGGGGTGATGAATCATATCGTTGGGATGAAAAACACCTTATCTAAATTCAATCCTCCGGAAGTACATAGCATTGATGGTTTTGGGAACTATAACTTGGAGGTTGGAGGAGTTGAAGGCACTGATTTTGAAAATAAATCAGTGCTCAACCTGTACTTTCTTGATAGTGGAGATTATTCCCAAGTTTCTACAATTCTTGGTTATGATTGGATCAAGCCCTCCCAGCAACTTTGGTTCCAACGAACATCTGCAGAACTTAGGAAAGCATACATAAGTAAACCAGTACCTCAGAAACATGCTGCTCCTGGTCTTGCATATTTCCACATCCCTCTACCAGAATATGCTAGTTTGGACTCATCAAACATGACAGGTGTGAAACTGGAACCGGCTGGCAATGGCATTAGCTCTCCTTCTGTGAACTCTGGCTTCTTCACAACCTTGCTTGCAGCAGGAGATGTGAAGGCAGTTTTCACTGGCCATGATCACCTCAATGACTTCTGTGGCAATCTAATGAATATACAACTTTGTTATGCTGGGGGATTCGGATACCATGCATATGGAAAGGCAGGGTGGTCTAGGAGAGCAAGAGTGGTGGTGGCTAGCTTGGAGAAAACGGAGAAAGGAAGCTGGGGAGATGTCAAGTCAATTAAAACATGGAAACGCCTTGATGATCAACATCTTACTGGAATTGATGGTGAGGTCCTGTGGAGCAAGAGCACTGGTGGTAACCAAGGATAA 1215 0.4288 MILSKRNVFGTKGKMGIDFMILVLTLSWFCLTTICVSATKQAYPPTPQPNQNLRFDQNGEFKILQVADMHYANGKTTHCLNVLPSQNFSCSDLNTTIFLNRMIKAEKPNLIVFTGDNIFAFDSSDSAKSLDAAFAPAIASNIPWVAVLGNHDQEGTLSRSGVMNHIVGMKNTLSKFNPPEVHSIDGFGNYNLEVGGVEGTDFENKSVLNLYFLDSGDYSQVSTILGYDWIKPSQQLWFQRTSAELRKAYISKPVPQKHAAPGLAYFHIPLPEYASLDSSNMTGVKLEPAGNGISSPSVNSGFFTTLLAAGDVKAVFTGHDHLNDFCGNLMNIQLCYAGGFGYHAYGKAGWSRRARVVVASLEKTEKGSWGDVKSIKTWKRLDDQHLTGIDGEVLWSKSTGGNQG* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0423 404 Gene3D - 60 370 IPR029052 -
Gso7g0423 404 PANTHER - 15 399 - -
Gso7g0423 404 Pfam Calcineurin-like phosphoesterase 61 322 IPR004843 GO:0016787
Gso7g0423 404 CDD MPP_Dcr2 59 346 - -
Gso7g0423 404 PIRSF Ptase_At2g46880 10 395 IPR011230 -
Gso7g0423 404 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 15 399 - -
Gso7g0423 404 SUPERFAMILY Metallo-dependent phosphatases 58 361 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0423 Gso-Chr7 3984522 3988753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0423 - - gmx:100783020 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0423 7 3984522 3988753 Gso7g0423 7 3984522 3988753 ECH
Gso7g0423 7 3984522 3988753 Gso16g0132 16 1403626 1407703 GST