Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0405 ATGGACCTCCCCAGCCACAAATTCTTTCAACCTCCATCTGCATTGGCACCACATGGGGAAGCACTACTCACTGAGAGCAACATGAGCTTGTATGGGAAAAGCAAAGACGACCCTTTTGCTGATGACTTCCCTGACCCACTTTGCAAGCTCAACCTTAAAGAAACCTCTGAGTTTGTCAAGTCATTGCCTTTGCCAATGCCAAATGGCAGAGCTGAAAGCAGAGGCCATTCTGTTTCACAACAGAGGAGGCTACTAGATTCACCCTCCACACCTGGAAGACCAGTTTTCACCTTCAGCTCTGGCCTTCCAAGAAAGAGCTTCCCTTCCAAATGGGATGATGCAGAGAAATGGCTCATGAGCACTTCTTGCCATGACTCACCTGCTCACAACAACAACACTACGAAGGTTTTAGTTTCAGACTCCTCAAAGGTCACAACCAGACAACAACAATCTGATGATGATGTTGGCTTCAAGCAGCAAATGGAAGGTTTCTCGGAGAAATCAAGGGTCACAGAAGAAAGGGTTTCGTCCAAAGCTGTCCCAAACTTCCCTTGGTCTCCTTCTTTGGACCACCACCATAACACACTCAGCGCTTTCCATGGCGTTAAAGACATTGTACTAAAAGATAAATTCACAGACAGCATAGAGCCAGTTTTGCCAAATTTGAGATATTTAGAACCTGCTAAAGAAGGGTTCTTGTTTAGGAACCAAGGTGATGGAGCAATGCAAGATGCTTGCACAGAAGTGGTTCAACATAGAGACATTGGGACTGAGATGACTCCACTGGGAAGTTCCACAACTTCAAGATGCCACACCCCAGTTAAGATTTCATCGCCTCCTCGGCACAACACTCCTGCAAGTAGGTCAGGGCCATTGGCCTTGGCTAGCAGTGCCTGCACTCTTGATGTTATTCAGCTTGAGGAGTGCCATTTTTCCAAGCTGCAACTAGGAACGCAGTATGATATAGTCCCTTTAAATTGGAGCTCAAGTGAGGAGGAAGAAAAGGAAATATCTAAAAGCTTGAGGCACAATGGTAGCCACAAAGCTGATTCAGACTGCATAGCTGCTGCATGGGAAGAAGAGGAGAAGACCAAGTGTTGTCTTAGGTATCAGAGAGAAGAAGCAAAAATCCAAGCTTGGGTAAACCTCCAAAATGCTAAAGCAGAGGCCAGGTCAAGAAAGCTTGAGGTGAAAATACAGAAGATGAAGTCAAGCCTAGAAGAAAAGTTGATGAAGAGGATGTCAGTGGTTCACAGGAAAGCTGAAGAGTGGAGAGCAGAAGCTAGACAACAACATTTGGAGCAAATCCACAAGGCCACTGAACAAGCTCAAAAGATGATTCATAAACATAACTCACAATTTTCAAGGCCCAGTTCATGTGGTTGCTTCCCTTGCAATAACAACCATCATTAA 1413 0.4522 MDLPSHKFFQPPSALAPHGEALLTESNMSLYGKSKDDPFADDFPDPLCKLNLKETSEFVKSLPLPMPNGRAESRGHSVSQQRRLLDSPSTPGRPVFTFSSGLPRKSFPSKWDDAEKWLMSTSCHDSPAHNNNTTKVLVSDSSKVTTRQQQSDDDVGFKQQMEGFSEKSRVTEERVSSKAVPNFPWSPSLDHHHNTLSAFHGVKDIVLKDKFTDSIEPVLPNLRYLEPAKEGFLFRNQGDGAMQDACTEVVQHRDIGTEMTPLGSSTTSRCHTPVKISSPPRHNTPASRSGPLALASSACTLDVIQLEECHFSKLQLGTQYDIVPLNWSSSEEEEKEISKSLRHNGSHKADSDCIAAAWEEEEKTKCCLRYQREEAKIQAWVNLQNAKAEARSRKLEVKIQKMKSSLEEKLMKRMSVVHRKAEEWRAEARQQHLEQIHKATEQAQKMIHKHNSQFSRPSSCGCFPCNNNHH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0405 470 MobiDBLite consensus disorder prediction 62 99 - -
Gso7g0405 470 PANTHER OS11G0616300 PROTEIN 1 466 - -
Gso7g0405 470 Coils Coil 385 405 - -
Gso7g0405 470 MobiDBLite consensus disorder prediction 73 96 - -
Gso7g0405 470 PANTHER OS02G0116800 PROTEIN 1 466 - -
Gso7g0405 470 Pfam Remorin, C-terminal region 355 451 IPR005516 -
Gso7g0405 470 MobiDBLite consensus disorder prediction 258 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0405 Gso-Chr7 3816163 3821097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0405 - - gmx:100819894 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0405 7 3816163 3821097 Gso7g0405 7 3816163 3821097 ECH
Gso7g0405 7 3816163 3821097 Gso16g0111 16 1207465 1212781 GST