Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0403 ATGGATGCAGTGGACAAGACTTTTTCTGAGCTTGTCAGCATTGTCAAATCATGGATTCCCTGGCGATCTGAGCCAGTAAATGTGTCTAGAGATTTTTGGATGCCCGATCAGAGTTGTAGAGTATGCTACGAGTGTGATTCACAGTTCACCTTATTTAACCGTAAACACCACTGTCGTCTTTGTGGGCGAATTTTCTGTAACAAGTGTACAACAAACTCGGTTCCTGCCCCATTTAGCAACCAAAGGAATTCTTGGGATGAGTTGGAAAAGATTCGCGTTTGTAATTATTGTTACAAGCAATGGGAGCAGGGCATAGTTGCTTTTGATAACAGTATTCCTGTTTCCAATCTGGATAATAGTGCTTCCGGATCAACTTCAAGCGTGGCTAGCAGTAAAACCAGTGCCACTGCAAACAGTAGTAATATTACTCTTTGCTCCATGCCATATTCAGTTGGGTCTTATCAACCAATGCAACAGGGTTCTGTTCTGAACCTGCATAAATCACCTGTGAAGGGGAAAGACCCCGATACTGATAGGGAAGGCTTATCAGCATTAGGAGGGAGGAGTGATCTTGTAGCAGACCTGGGTGATCCATTACCGAAGCAATACAGATTCTCAATAAACAGGAGTGATGATGATGAGGATGAGTATGGTGTATATCGGTCAGATTCTGATATGAGGGATTATCCTCAAGTGAATAACTACTATGTACAAGCTGAGCTTCACGGGATAGGCAACATTGATGGCTCACAGAAAGTGGATCTTGATGGAGAAAACACTAATGCCAAACTCCCTTCAAACTACAGTTTTGACACACAGGATTTGGAAGGAGCCCAAGTTATTGCCAAAAATGAAGATGAACCTTATATCTGTGATGAAAATGAAGCCCCTTCCTCGTTGTATGTTTCAGAGGATGTTGATGCTGAACCTGTTGATTTTGAAAATAATGGACTTCTCTGGCTCCCTCCTGAACCAGAAGATGAAGAAGATGAACAGGAAGCTATTCTGTTTGATGATGATGATGATCATGACGGGAATGCCACCGGAGAGTGGGGCTATCTGCGCAGTTCAAGCAGTTTTGGAAGTGGTGAGTATCGACACAGAGATAGGTCAAGCGAGGAGCACAAGAATGTAATGAAGAATGTAGTTGATGGGCATTTTAGGGCATTGGTATCTCAGCTGTTACAGGTTGAGAACTTACCTGTCGAAGATAATGACAAAAACAGTTGGTTGGAGATTGTCACATCTCTGTCATGGGAAGCTGCTACTTTATTGAAACCAGATATGAGCAAAGGTGGTGGGATGGACCCAGCTGGTTATGTGAAAGTCAAATGCATAGCATGTGGGAGCCGCATTGAAAGTGTGGTGGTTAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCACCGGAGAATGACGTCAAAAGTGGATAAACCTCGCTTGTTGATCCTTGGAGGGGCTCTAGAGTATCAACGTGTTACCAACCTCTTATCTAGTGTAGATACCCTATTGCAGCAGGAAATGGACCATCTGAAGATGGCAGTGGCAAAGATAGCTTCACACCAACCAAACATCTTGTTGGTGGAGAAATCAGTCTCGCGATATGCGCAGGAATATCTTCTTGCAAAGGACATATCTTTGGTTCTCAATGTCAAGAGACCACTTTTGGAGCGCGTAGCACGTTGCACAGGCACTCAAATAGTGCCTTCAATTGATCATCTGTCATCACAAAAGTTGGGTTACTGTGAAACATTTCATGTTGAAAAGTTTCTTGAAGACCTAAATAGTGCTGGTCAGGGTGGGAAAAAAACAATGAAAACATTGATGTTTTTCGAAGGTTGCCCAAAACCATTGGGTTTCACAATTTTACTTAAAGGTGCTGACAAGGATGAATTGAAGAAGGTAAAACATGTGGTTCAGTATGGAGTTTTTGCAGCTTACCATTTGGCTTTGGAGACATCTTTTCTTGCAGATGAAGGAGTCTCCCTGCCAGAAATTCCATTAAACAGTCTGGCCCTTCCTGATAAATCATCATCCATTCAGAGGTCTATTTCAACAGTTCCTGGTTTCGGCATTGCTGACAATGAAAAGCCTCAAGGGCTAGAACCTTACACTGAACCACAGAGAACCAAAAGTCTCACAGCTGCTGATCTAGCCTCGTCAACCTGCGGTACAGGGCCGTGTTTGTCTAATGGTGCTTCTCAATCTATGGCACTTGGATCAAGTCTCAACTATTCAACTGCCTTATACTCCTCCATTGTTGCTTCAGGAAATTCAATTCCAGAATCGCACCATAATAAGCTTCTTTCATGCACTAGTAGAGACACAAATGAAATGAACTCCAAACAAACTGTGGTGGAAGAAACTTCTAGAGTGGACAACACATTAGTTGTTGGGGATGATCCTACTGTAGAGGACCCTGGATCTTCAGAGAAATTATATCAAGGCATGTCAGCTGACACTCCACAAAATGGTGATAGCAAAATCTCTAAAAATCAGTTAAGTGGGTCAGGATCTTTATCTCCAAAAGATGTTCAAAACCATCCCGAGAACCTTGAAATCACAAATGAAGAGCCAGTTCCCGAAAAAGAAGAGTTTCCTCCATCTCCCTCCGACCATCAAAGCATTTTGGTGTCTTTGTCCTCCCGGTGCGTTTGGAAGGGAACTGTATGTGAGAGGTCTCATCTCTTTCGCATTAAATACTATGGCAGCTTTGATAAACCATTGGGTCGATTTCTGCGGGACCATTTATTTGATCAGAGTTATCGATGCCATTCTTGTGAAATGCCATCAGAAGCACATGTGCATTGCTATACTCATCGACAGGGAACACTTACCATATCCGTCAAGAAACTACCAGAAATTATCCTACCTGGTGAAAGGGATGGAAAGATTTGGATGTGGCACAGGTGCTTGCGGTGTCCAAGAATCAACGGCTTTCCTCCTGCTACACAGAGAATAATAATGTCTGATGCTGCTTGGGGTTTATCACTTGGGAAGTTTTTGGAGCTCAGTTTCTCAAACCACGCTGCAGCCAGCAGGGTGGCCAGCTGTGGTCATTCTTTACACAGAGATTGTCTTCGTTTTTATGGATTTGGAAGAATGGTTGCTTGTTTTCGATATGCATCAATTGATGTTCACTCAGTCTACCTTCCCCCCCACACACTTATATTTGATTATGGGAATCAGGATTGGATACAACAAGAATCAGATGAGGTGGTCAATCGGGCAGAGCTTTTATTCTCTGAGGTCCTCAATGGCCTTAGTCAAATTGGAGAGCAAAGATCTAATGCACTCCAAGTCAGTAATGGCCATAAATCACCTGAATTAAGACGCCAAGTTGCTGAACTAGAGGGGATGTTGCAAAAGGAGAAACTAGAATTTGAGGAAACTCTTCAAAAGATTTTGAACCAAGAAAAGAGAAATGGCCAACCTGGGATTGATGTTCTGGAAATTAATCGATTGTGGAGGCAGTTACTTTTTCAATCATATATGTGGGACCACCGTCTTATTTATGCTGCCAACCTAGTCAATTCCAACTATGAATCTGGTTCAAGCAGTCCAATTTCAGAGGATAAGGAGAAACCTACTGATGAAAATCAGATGAGCATTAACTCTATTCATGGTGATCCAAAGCTTAACGGTAGCCCCAGCCATGGAGGAGGAAGTGTAGTAGTTGATGGCAAAATTTCACATGATGCATCGCATCAAGAAATTGACATGGCCAAAAATAAAAATCTTGAGAAAGATGACGAATCTGATCTTCCAAACAGCAAAAGCATAAATGATCAATCCAACCTTTTAGAACCTGAATTGGGTGTTGGCAGAGCTCTCTCTGATGGACCGTTTCCTGTCATTCCTAGTTTGTCTGAAACACTTGATGCAAAATGGACTGGTGAAAACCACTCAGGATATGGAATTCAAAAGGATAACAGTTCTGTAAATCCTGATATACTTATGGCAGATGCTTTGACGACCAGTGCACAAAAAGAAACATATTATCTAGGGGATCGTACAGAAGATCAAAATGGTTCCAAGAGTTTCTATTCTTCTTTTAAAGGTCATGATAATATGGAAGACTCTTCAAACTGGTTAGGAATGCCCTTCTTGAACTTCTATCGCCAATTTAACAGGAACCTTTTTGCTAGTACACAGAAGTTTGATACCCTAGTTGACTACAATCCTGTTTATGTGTCATCTTTCCGGAAGCAAGAACTCCAGGGTGGGGCAAGGCTGCTTCTACCAATTGGTGTCAATGACACTGTAATTCCAGTATATGATGATGAACCCTCAAGTATTATAGCTTATGCCTTAATGTCACCAGAATATCATTTCCAATTAAATGATGAAGGAGAAAGGCCAACAGAAGGAAATGAGTTCACTTCATCATATTTTTCTGACTCAGGCACCTTGCAGTCATTCTCATCTGTTGACGAAACAGCTTTTGATTCTCAAAAAAGTTTTGGATCGATAGAGGAAATGATATTTTCCATGTCTGGGTCTCGTAATTCATCAATATTGGACCCAATGTTATATACTAAGGCTATGCATGCTAGAGTTTCCTTTGGAGTAGATGGTCCCCTTGGCAAGGTAAAATATTCTGTGACTTGTTACTATGCCAAGCGATTTGAAGCCTTAAGAAGGGTCTGTTGTCCTTCAGAGCTAGACTATATAAGGTCTCTGAGTCGCTGTAAGAAATGGGGAGCTCAAGGTGGGAAGAGTAATGTATTCTTTGCAAAAACTTTGGATGATCGATTTATCATCAAACAAGTTACCAAAACAGAGCTTGAGTCATTCATTAAATTTGGTCCTGAATACTTCAAGTACCTTTCTGAATCCATAGGCACTGGAAGTCCGACTTGCCTGGCAAAGATTCTTGGCATATACCAGGTTACATCAAAGCATCTTAAAGGAGGGAAGGAATCAAGGATGGATGTTTTGGTTATGGAGAATCTTCTGTTTAGGAGGACTGTGACACGACTTTATGATCTTAAAGGATCTTCCAGGTCTCGGTATAATGCAGATAGTACCGGGAAAAACAAAGTTCTACTGGACCAGAACTTAATTGAAGCAATGCCAACTTCTCCTATTTTCGTGGGAAACAAAGCGAAAAGATTGTTAGAGAGAGCTGTCTGGAATGACACTGGTTTTCTTGCTTCAGTTGCTGTGATGGACTATTCTTTACTGGTTGGAGTGGATGAAGAGAAGCATGAGTTGGTTATTGGAATCATTGATTTCATGAGGCAGTATACCTGGGACAAGCATCTTGAAACATGGGTAAAAGCTTCAGGCATCCTTGGAGGACCAAAGAACACATCTCCTACAGTTATATCACCCAAGCAATACAAGAAAAGGTTCAGGAAAGCAATGACCACTTACTTTCTCATGCTTCCTGATCAGTGGTCTCCTTCTATTATTCCTAGTCATTCTCAGTCTGATTTTGGTGAAGACAACACACAACCTAGGACTCCAGCTGAATGA 5478 0.4175 MDAVDKTFSELVSIVKSWIPWRSEPVNVSRDFWMPDQSCRVCYECDSQFTLFNRKHHCRLCGRIFCNKCTTNSVPAPFSNQRNSWDELEKIRVCNYCYKQWEQGIVAFDNSIPVSNLDNSASGSTSSVASSKTSATANSSNITLCSMPYSVGSYQPMQQGSVLNLHKSPVKGKDPDTDREGLSALGGRSDLVADLGDPLPKQYRFSINRSDDDEDEYGVYRSDSDMRDYPQVNNYYVQAELHGIGNIDGSQKVDLDGENTNAKLPSNYSFDTQDLEGAQVIAKNEDEPYICDENEAPSSLYVSEDVDAEPVDFENNGLLWLPPEPEDEEDEQEAILFDDDDDHDGNATGEWGYLRSSSSFGSGEYRHRDRSSEEHKNVMKNVVDGHFRALVSQLLQVENLPVEDNDKNSWLEIVTSLSWEAATLLKPDMSKGGGMDPAGYVKVKCIACGSRIESVVVKGVVCKKNVAHRRMTSKVDKPRLLILGGALEYQRVTNLLSSVDTLLQQEMDHLKMAVAKIASHQPNILLVEKSVSRYAQEYLLAKDISLVLNVKRPLLERVARCTGTQIVPSIDHLSSQKLGYCETFHVEKFLEDLNSAGQGGKKTMKTLMFFEGCPKPLGFTILLKGADKDELKKVKHVVQYGVFAAYHLALETSFLADEGVSLPEIPLNSLALPDKSSSIQRSISTVPGFGIADNEKPQGLEPYTEPQRTKSLTAADLASSTCGTGPCLSNGASQSMALGSSLNYSTALYSSIVASGNSIPESHHNKLLSCTSRDTNEMNSKQTVVEETSRVDNTLVVGDDPTVEDPGSSEKLYQGMSADTPQNGDSKISKNQLSGSGSLSPKDVQNHPENLEITNEEPVPEKEEFPPSPSDHQSILVSLSSRCVWKGTVCERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCHSCEMPSEAHVHCYTHRQGTLTISVKKLPEIILPGERDGKIWMWHRCLRCPRINGFPPATQRIIMSDAAWGLSLGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGRMVACFRYASIDVHSVYLPPHTLIFDYGNQDWIQQESDEVVNRAELLFSEVLNGLSQIGEQRSNALQVSNGHKSPELRRQVAELEGMLQKEKLEFEETLQKILNQEKRNGQPGIDVLEINRLWRQLLFQSYMWDHRLIYAANLVNSNYESGSSSPISEDKEKPTDENQMSINSIHGDPKLNGSPSHGGGSVVVDGKISHDASHQEIDMAKNKNLEKDDESDLPNSKSINDQSNLLEPELGVGRALSDGPFPVIPSLSETLDAKWTGENHSGYGIQKDNSSVNPDILMADALTTSAQKETYYLGDRTEDQNGSKSFYSSFKGHDNMEDSSNWLGMPFLNFYRQFNRNLFASTQKFDTLVDYNPVYVSSFRKQELQGGARLLLPIGVNDTVIPVYDDEPSSIIAYALMSPEYHFQLNDEGERPTEGNEFTSSYFSDSGTLQSFSSVDETAFDSQKSFGSIEEMIFSMSGSRNSSILDPMLYTKAMHARVSFGVDGPLGKVKYSVTCYYAKRFEALRRVCCPSELDYIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFIKFGPEYFKYLSESIGTGSPTCLAKILGIYQVTSKHLKGGKESRMDVLVMENLLFRRTVTRLYDLKGSSRSRYNADSTGKNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTGFLASVAVMDYSLLVGVDEEKHELVIGIIDFMRQYTWDKHLETWVKASGILGGPKNTSPTVISPKQYKKRFRKAMTTYFLMLPDQWSPSIIPSHSQSDFGEDNTQPRTPAE* 1826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0403 1825 Gene3D GroEL 453 625 IPR027409 -
Gso7g0403 1825 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1B 1 1815 - -
Gso7g0403 1825 SMART PIPK_2 1503 1794 IPR002498 GO:0016307|GO:0046488
Gso7g0403 1825 SUPERFAMILY SAICAR synthase-like 1521 1793 - -
Gso7g0403 1825 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Gso7g0403 1825 Gene3D - 1652 1794 - -
Gso7g0403 1825 Pfam TCP-1/cpn60 chaperonin family 407 647 IPR002423 GO:0005524
Gso7g0403 1825 MobiDBLite consensus disorder prediction 1240 1256 - -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 854 868 - -
Gso7g0403 1825 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1569 1735 IPR002498 GO:0016307|GO:0046488
Gso7g0403 1825 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 23 107 IPR013083 -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 769 871 - -
Gso7g0403 1825 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 813 852 - -
Gso7g0403 1825 SUPERFAMILY FYVE/PHD zinc finger 31 103 IPR011011 -
Gso7g0403 1825 CDD FYVE_PIKfyve_Fab1 32 99 - -
Gso7g0403 1825 SUPERFAMILY GroEL apical domain-like 453 625 IPR027409 -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 1805 1825 - -
Gso7g0403 1825 CDD Fab1_TCP 388 659 - -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 1240 1263 - -
Gso7g0403 1825 CDD PIPKc_PIKfyve 1530 1793 IPR044769 GO:0000285
Gso7g0403 1825 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1469 1650 IPR027484 -
Gso7g0403 1825 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 1 1815 - -
Gso7g0403 1825 SMART fyve_4 28 103 IPR000306 GO:0046872
Gso7g0403 1825 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1469 1793 IPR002498 GO:0016307|GO:0046488
Gso7g0403 1825 Coils Coil 1106 1140 - -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 769 790 - -
Gso7g0403 1825 MobiDBLite consensus disorder prediction 1180 1226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0403 Gso-Chr7 3792298 3803246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0403 2 1825 EF-hand Containing Proteins AT3G14270 60.247 0.0 2096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0403 K00921 - gmx:100819364 3621.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0403 7 3792298 3803246 Gso7g0403 7 3792298 3803246 ECH
Gso7g0403 7 3792298 3803246 Gso16g0109 16 1176666 1187576 GST