Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0378 ATGGCTTCTGTTCTGTCCACTTCGTCAATTTCATTGGCTACTCTCTCCTTCAATTCTGGGGTCAGAAGAACAACCACTCACCAAATTAAGAACCTATCCATAATGGGAAGCTCTATGTTTGGTGAGCTAAAACTTGTGAACAAAGTCCAGTTAAAAAGGGCAACAAAAACGTCATTTGCACTCTCTGGTGGCATTAACACTATAATCTCGTGCTCCACGGCTGAACTAGAAACTCTGCAAATTGTACAAAGCACAATTGCGAAGCAGCTTTCTATTGATGAAGCCACTGTGACTCCCCAAACTAAATTTTCAGATTTGGGTGCTGATTCTCTTGACACCGTTGAAATCATGATGGCTTTGGAAGAGAAATTTGACATTTCCATTGGAGAGGGTGGAGCTGAGAACATCTCCACCGTTCAAGATGCTGCTGATCTGATTGAGAAGGTGACGAATGCTTCAACCTAA 465 0.4237 MASVLSTSSISLATLSFNSGVRRTTTHQIKNLSIMGSSMFGELKLVNKVQLKRATKTSFALSGGINTIISCSTAELETLQIVQSTIAKQLSIDEATVTPQTKFSDLGADSLDTVEIMMALEEKFDISIGEGGAENISTVQDAADLIEKVTNAST* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0378 154 Gene3D - 72 149 IPR036736 -
Gso7g0378 154 ProSiteProfiles Carrier protein (CP) domain profile. 73 150 IPR009081 -
Gso7g0378 154 PANTHER ACYL CARRIER PROTEIN 36 153 - -
Gso7g0378 154 Hamap Acyl carrier protein [acpP]. 77 150 IPR003231 GO:0006633
Gso7g0378 154 TIGRFAM acyl_carrier: acyl carrier protein 77 148 IPR003231 GO:0006633
Gso7g0378 154 PANTHER ACYL CARRIER PROTEIN 36 153 IPR044813 GO:0000036|GO:0006633
Gso7g0378 154 SUPERFAMILY ACP-like 77 150 IPR036736 -
Gso7g0378 154 Pfam Phosphopantetheine attachment site 82 146 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0378 Gso-Chr7 3573652 3575030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0378 55 151 Acyl Lipid Metabolism Gene Families AT3G05020 47.525 8.47e-22 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0378 - - gmx:100813498 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0378 7 3573652 3575030 Gso7g0378 7 3573652 3575030 ECH