Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0370 ATGGAAGACGAAATGGCGATGGGCACTTCTCCCAGTTACTTCGACCCTCACAACCTCTCCTCCAGACAGCAGTTCCGCAGATACGGGAAGAGACACTCAAGTTCAGGTGCTTCAATCCAATACGACAACTCGGCTTCTAAGTTAAGTGAAACTGGGTTGTTATATGATGGCCAAAGCATCCATAGTCCAACTAATGCAGCACTTGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTACCTGGAAGAGAAGACACCATATTCCACTAGAAGGAAATTGTCTGCCGTTATTGATGGAGTCCCTGGGGTGGATGCTGGTTTTGACTCTGGACGCTACTCATTAAAGGCTTGTAAGACAGAGGGTGACTCATTGGGAGATGGTGCAGAAACAATCTTCACTTTATTTGCATCTCTGCTTGATTCTTCTTTGCAAGGACTGATGCCTATTGCTGATCTGATACTAAGAGTTGAGAATGCATGCCGAAATGTTTCAGAGTCTATAAGGTATGGTTTGAATATAAGGCATCGAGTTGTTGAGGACAAATTGATGAGGCAGAAGGCTCAGCTCTTGCTTGATGAGGCGGCAACATGGTCTCTCTTGTGGTTCCTTTATGGGAAAGTGACTGAAGAACTATCTAAAGATCAAATACTGGTGTCAGGAACCTCACATGTGGTGGCTTGTGAGTTTGTTGTGGAGGACCACACAGCTCAATTATGCCTTCGGATAGTCCAGTGGTTAGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGCAAAGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCCAGCTGTGGAGTTTGGCATCATACTCAGCGTTACCTGAAGAAAGGAAATCTTGACATGAATGTTGTTCATCACTTGGACTTTGATGCTCCAACCCGTGAAAACGCTAATCTTTTGCCTGATGACAAGAAACAAGATGAATCTCTTCTAGAAGATGTATGGATTCTTTTAAGGGCTGGAAGGCTAGAAGAGGCTTGTGGACTTTGCCGGTCCGCTGGACAGCCATGGAGAGCTTCTTCTCTTTGCCCATTTGGAGGCTTGAACACGTTTCCTTCTGTTGAAGCTCTGGTGAAGAATGGTAAAAATAGAACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATTTTGTGCATCAGAGAAAATAGCAGACCAAGGTGGGAAATGTGAAGCAGCTGTATATGCAGCCCAGTGTAGCAACCTAAAACGGATGCTTCCACTCTGCAACGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTGCAGGTGGACTTGGAAATCACTCGTTCACTGCCAGGGGGAGTTGATCAGCTTAGAACTTTTGGAGATGTAATTGATGGAAGCCCTGGAAATGCTGATGGTTCCTTTGAGCCTTCTAATGGACCTGAAAATTGGCCAATTCAAGTTTTGAATCAGCAACCTCGACAACTCTCATCTCTTCTTCAGAAACTTCATTCAGGGGAAATGATTCATGAAGCTGTTACCCGACAATGCAAGGAGCAACAGCGACAAATTCAGATGACTTTAATGCTAGGGGACATACCGCGTGTACTAGATCTTATATGGTCATGGATAGCACCTACTGAAGATAATCAGAATGTATTTAGGCCTAGTGGAGATCCTCAAATGATACGATTTGGTGCACACCTAGTGCTTGTGCTTAGATATTTACTTGCCGAGGAAATGAAGGACACCTTCAAGGACAAGATTCTGAGTGTTGGTGATAATATTTTGCACTTGTATGCCCTATTTCTCTTTTCAAAGGAGCATGAGGAGTTGGTGGGCATATATGCTTCTCAGCTTGCACGCCACCGTTGCATTGATCTCTTTGTGCACATGATGGAACTTAGGCTGCACAACAGTGTACATGTCAAATACAAGATATTCCTTTCCGCTATGGAATATTTGCCATTTTCTTCTATGGATGATTCCAAGGGAAATTTTGAAGACATTATTCAGAGAATTTTGTTGAGATCCCGAGAGATCAAGGTTGGCAAATACGATAACCTGTCAGATGTTGCAGAACAACACAGACTGCAGAGTCTTCAAAAAGCTAAAGTCATCCAGTGGCTTTGCTTTACACCACCATCAACAATTACTAATGTCAAAGATGTCAGTAAAAAGCTGCTTCTCCGAGCACTGATTCATAGCAACATACTCTTCCGGGAGTTTTCTTTGATTTCTATGTGGAGAGTACCAGCAATGCCTATAGGTGCCCACACAGTACTTGGTTTTCTTGCTGAACCCTTAAAACAGCTTGCAGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAACTGAAGTAGAGAATGCAGAAGTTCCTATCTCGGAACTGTCACTAGAGGAAAAGGAAAGGGCCATTTCAGCTGCCAAGGAAACACTGAGTGCATCCCTTTCACTACTAAAAAGAAAAGAAACACCTTGGTTGGCTTCGACTGATTGTATGTATGAATCAGCTGAACCTGTTTTCCTTGAACTTCATGCAACAGCAATGCTCTGCTTGCCATCTGGAGAGTGTTTGTGTCCAGATGCTACTGTTTGTACTACACTGACGAGTGCCCTCTACTCTTCGGCTGGTGATGAGGTTGTCTTAAATCGACAACTAATGGTGAATGTTTCCATATCTTCAAGGGACAGTTATTGCATTGATGTTGTTCTTCGTTGCTTAGCAATAGCTGGTGATGGACTTGAACCACATGATCTCAATGACGGTGGTATTCTTGGCACCATCATGGCTGCTGGTTTTAAAGGTGAGCTTCCTCGGTTTCAAGCTGGAGTTACAATGGAAATATCCTGTTTGGATGCATGGTATTCTGACAAAGATGGTACCTTAGAGTGCCCGGCAACATACATTGTGAAAGGACTTTGTCGTAGGTGCTGTCTCCCAGAAGTCATTCTTCGTTGCATGCAAGTTTCTGTTTCTCTTATGGGATCGGGAGTCCTGCCTGATTGTCATGATACTTTGATAGAACTGGTTGGCAGTCCTGAAACCGACTTTCTTCACTTGTTTAGTCAACAGCAATTACAGGAGTTTTTATTGTTTGAGAGGGAATACTCAATCTGCAAAATGGAGATTACAGAGGAGTGA 3243 0.4351 MEDEMAMGTSPSYFDPHNLSSRQQFRRYGKRHSSSGASIQYDNSASKLSETGLLYDGQSIHSPTNAALVLENIKQEVESLDADYLEEKTPYSTRRKLSAVIDGVPGVDAGFDSGRYSLKACKTEGDSLGDGAETIFTLFASLLDSSLQGLMPIADLILRVENACRNVSESIRYGLNIRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKVTEELSKDQILVSGTSHVVACEFVVEDHTAQLCLRIVQWLEGLASKALDLEAKVRGSHVGSYLPSCGVWHHTQRYLKKGNLDMNVVHHLDFDAPTRENANLLPDDKKQDESLLEDVWILLRAGRLEEACGLCRSAGQPWRASSLCPFGGLNTFPSVEALVKNGKNRTLQAVEFESGIGHQWHLWKWASFCASEKIADQGGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMAKSWLDVQVDLEITRSLPGGVDQLRTFGDVIDGSPGNADGSFEPSNGPENWPIQVLNQQPRQLSSLLQKLHSGEMIHEAVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVFRPSGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLYALFLFSKEHEELVGIYASQLARHRCIDLFVHMMELRLHNSVHVKYKIFLSAMEYLPFSSMDDSKGNFEDIIQRILLRSREIKVGKYDNLSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKDVSKKLLLRALIHSNILFREFSLISMWRVPAMPIGAHTVLGFLAEPLKQLAETLETSEDYNVFEDLREFQDWREYYSCDATYRNWLKTEVENAEVPISELSLEEKERAISAAKETLSASLSLLKRKETPWLASTDCMYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVSISSRDSYCIDVVLRCLAIAGDGLEPHDLNDGGILGTIMAAGFKGELPRFQAGVTMEISCLDAWYSDKDGTLECPATYIVKGLCRRCCLPEVILRCMQVSVSLMGSGVLPDCHDTLIELVGSPETDFLHLFSQQQLQEFLLFEREYSICKMEITEE* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0370 1080 Pfam Nuclear pore protein 84 / 107 194 864 IPR007252 GO:0005643|GO:0017056
Gso7g0370 1080 Gene3D - 700 892 - -
Gso7g0370 1080 Gene3D - 279 428 - -
Gso7g0370 1080 PANTHER NUP107-RELATED 4 1079 IPR007252 GO:0005643|GO:0017056
Gso7g0370 1080 PANTHER NUCLEAR PORE COMPLEX PROTEIN 4 1079 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0370 Gso-Chr7 3492495 3508829 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0370 K14301 - gmx:100786552 2174.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0370 7 3492495 3508829 Gso7g0370 7 3492495 3508829 ECH
Gso7g0370 7 3492495 3508829 Gso16g0082 16 924035 928555 GST