Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0330 ATGGCGGAAACCGCTTCACCATCTTCCAAACCCTCACCAATGGACCCTCAAATTCAAAACCCCGCACCCTCCAACTCCAACTCCAACCCTCCAATCCCTTCCCCTTCCCCTTCTCACAACATGGCCTCTCCCTCTCTCCCACCCCTCCCCCAAGACCAACAACAACAACTTCAGCAACAGCTAAGTCCCCCTCAACAACAACAACAACAACAACAACAACAACAACAACCTTTGGTTTCTTCGAACAGCATGAACAACATGAACCCTATCTCCAATTTCCAGCTCCAGCAATCCATGCAGCGATCGCCTTCCCTCTCGCGCCTCAATCAGATTCAGCCTCAGCAGACAACGCAGCAGCAGCAGCAGTTTGGTGTCATGCGCCAGCAGGCCGGATTGTACGGCGGACAGATGAGCTTCGCCGCCGCGGGTGGTGCCGGTGCCGCTCAGCAGCAGCAATTGGGAGGGTCGAATCTGTCGCGGTCGGCGTTGATGGGGCAGAGCGGGCACTTCCCCATGCTTTCCGGGGCTGGAACGCAGTTTAATTTACTCTCCTCGCCAAGGCAGAAAGGTGGGCTAGTCCAGTCGTCTCAATTCTCTTCAGGTAATTCTGCTGGACAATCACTGCAAGGAATGCAAGCAATGGGTATGATGGGGTCGCCAAATCTCACCTCGCAACTACGAGCAAATGGAGCCATGGCTTATGCACAGCAGCTGCGTATGAGTCAGGGTCAAATCAGGCAGCAACTATCCCAGCAAGGTTCACTTAACACTGCACAGGTTCAAGGTTTACCAAGGTCATCATCCCTTGCTTTTATGAGTTCTCAGTTGTCTGGGTTGTCTCAGAATGGACAACCTGCAATGATTAACTCTTTAACACAGCAACAGTGGCTTAAGCAAATGCCAGCAATGTCTGGCCCTGCCGCACCATTGCGTCTTCAACACCAGAGGCAGCAGCAGCTGGGTTCTTCTACCCAATTGCAACAAAACTCCATGACCCTGAACCAACAGCAATTGTCCCAGCTGATGCAGCAACAGAAATCGATGGGGCAGCCTCAGCTGCTTCAGCAGCAACAACAACAGCAGCAGCAGCCGCAGCCTCAACAGCTGCAACAACAGCTTATACAACAGCAGCCACAACAACAATCTCATCTACAAGTTTCGGTCCATCAACAGCAACAGCAACAGCAACAGTCTCCAAGGATGCCAGGACCTGCAGGCCAAAAGTCACTTAGTCTAACAGGATCACAGCCAGATGTGACTGCATCTGGCGCAACTACACCAGGTGGTAGTTCTAGCCAAGGAACTGAAGCTACAAACCAAGTCCTTGGGAAGAGAAAGATACAAGATTTAGTTGCACAGGTGGATCCACAAGGTAGGCTGGACCCCGAAGTTATAGATCTTCTTTTAGAGCTTGCTGATGACTTCATTGATTCTGCAACTACACATGGTTGCATTTTGGCGAAACATAGAAAATCGTCAACTTTGGAGTCCAAGGATTTATTGCTACACCTAGAGAAAAATTGGGATTTAACAATTCCCGGATACTCAAGTGAAGAGAAGAAGAATCAGAGCAAACCTCAATTAAATGACCTTCACAAGAGGCGCCTAGATATGGTTCGCACATTGATGGAATCCTCATCCTCTGAGTCGAGTATTAACAGCTCTAAAGAGATGAGTAGACAGGGCATTTCTAATCCTCCCCCTGTAGGAACCCATCATCTAGTAAGACCCTTGAGTCCAGAGCAGTTGGTTTCTCATGCAGCTGGTTCTCAAATGCTACAGCAGATGACAAGGTTTTAA 1800 0.4967 MAETASPSSKPSPMDPQIQNPAPSNSNSNPPIPSPSPSHNMASPSLPPLPQDQQQQLQQQLSPPQQQQQQQQQQQQPLVSSNSMNNMNPISNFQLQQSMQRSPSLSRLNQIQPQQTTQQQQQFGVMRQQAGLYGGQMSFAAAGGAGAAQQQQLGGSNLSRSALMGQSGHFPMLSGAGTQFNLLSSPRQKGGLVQSSQFSSGNSAGQSLQGMQAMGMMGSPNLTSQLRANGAMAYAQQLRMSQGQIRQQLSQQGSLNTAQVQGLPRSSSLAFMSSQLSGLSQNGQPAMINSLTQQQWLKQMPAMSGPAAPLRLQHQRQQQLGSSTQLQQNSMTLNQQQLSQLMQQQKSMGQPQLLQQQQQQQQQPQPQQLQQQLIQQQPQQQSHLQVSVHQQQQQQQQSPRMPGPAGQKSLSLTGSQPDVTASGATTPGGSSSQGTEATNQVLGKRKIQDLVAQVDPQGRLDPEVIDLLLELADDFIDSATTHGCILAKHRKSSTLESKDLLLHLEKNWDLTIPGYSSEEKKNQSKPQLNDLHKRRLDMVRTLMESSSSESSINSSKEMSRQGISNPPPVGTHHLVRPLSPEQLVSHAAGSQMLQQMTRF* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0330 599 Gene3D Histone, subunit A 437 512 IPR009072 GO:0046982
Gso7g0330 599 MobiDBLite consensus disorder prediction 542 575 - -
Gso7g0330 599 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 360 598 IPR037794 GO:0000124|GO:0005669|GO:0046695
Gso7g0330 599 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12 7 378 IPR037794 GO:0000124|GO:0005669|GO:0046695
Gso7g0330 599 MobiDBLite consensus disorder prediction 1 25 - -
Gso7g0330 599 MobiDBLite consensus disorder prediction 311 326 - -
Gso7g0330 599 CDD TAF12 442 510 IPR003228 GO:0005669|GO:0006352
Gso7g0330 599 MobiDBLite consensus disorder prediction 302 326 - -
Gso7g0330 599 MobiDBLite consensus disorder prediction 338 441 - -
Gso7g0330 599 Pfam Transcription initiation factor TFIID subunit A 443 510 IPR003228 GO:0005669|GO:0006352
Gso7g0330 599 MobiDBLite consensus disorder prediction 45 123 - -
Gso7g0330 599 SUPERFAMILY Histone-fold 440 511 IPR009072 GO:0046982
Gso7g0330 599 MobiDBLite consensus disorder prediction 26 44 - -
Gso7g0330 599 MobiDBLite consensus disorder prediction 542 566 - -
Gso7g0330 599 MobiDBLite consensus disorder prediction 1 123 - -
Gso7g0330 599 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 360 598 - -
Gso7g0330 599 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12B 7 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0330 Gso-Chr7 3115786 3125042 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0330 K03126 - gmx:100783017 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0330 7 3115786 3125042 Gso7g0330 7 3115786 3125042 ECH