Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0308 ATGGACCAACAAGAGGGTAACACGTGGACAATGCCACCGTTCTGGGCGGTTGAGCAGCGAAACCGCCGCCGTCTTCGCCGCTCTTACTCTCTGTTGCTCACCTCCACCTCCCTCCTCGTACTCTTCCTCGTACTCGTGCTGGTGTTCTCGCTCATCGTGGTTCCGACGTTGCACTCGTTCGCTTCCAACATCTTCAAACCTCGTACAGTTAAGAACAGCTGGGACTCCCTCAACCTCGTACTCGTTCTCTTCGCCATTTTTTGCGGCTTCCTCAGCAGAAACAACAACACCTCCGAAACCCTAACTCCGCGCTCTCGCAGAACGTTCTCGAACCCTTCAACGCCACCATCAGCATGGTACCAAAACGATTACTCTCAGATTCATAATCGATCGTTTAATAGGTTGAGGAGCTTTAATTCCTACCCCGATCTGCGGCAACAGATCGCCGCCGATGAAAGGTTCCGGTTTTATGATGATACTTACCTTCTCCGGCACCGGAACATGAGAACTGAGACTGAAGAAGAAGAAGAAAAGGAAATAGGAATTGATAATGTTGCCACTGCGCCGCCGCAATCGCCGCCGCAACAGGGAATGGAAGCTGTTGGAAGAAATGTCAAGCGAGCATATCAAGTGGAAACCGTCGAGGAGCATAAAAAGGAAGATTTAGATGCGCAGATTTCACCGCCGCCGCCGGCGACGAGATCAAAAGGTGTTCGACGGAATGTCAAGCGAACATATCAAGCGGAAGCCGTTGAGAAACATGAAACAAATGATTTTCCTGTGATGGATTCACGACCGCCGCCGGTGACAATAACCAAAGGTGTTCGACGAAATGCAAAGCGAACATATCAGCCAGAAACCATGGAGAAACGCGAAACAAACGATTTTGATGAGCAGAATTCACAAACGCTGCCGTCACCTCCGCCGCCGCCGGTGACACGAAGGAGAGGAGTTCGACGAAATGCCAAGCCGGAAGGAAATGATTCCGTTGTGAAGAGTTCACCCCCACCTCCACCACCTCCGCCGCCGTTGCCTGCGGAGGAGGCGAGGACAGTGTCGGGTAAGAAGAAAAGAGGGAGTGCTACTAAAGAATTTTTGATATCTTTAAGAGGGAAGAAGAAGAAACAAAGACAAAGAAGCGTTGAAAATTTTGATATCATTCTAGGTTCTGAATCATTATTTTCACAACCCCCTCCACCACCGCCACTGCCACCACCTAAGGTTTTTCAGAACTTGTTTTCTTTGAAGAAAGGGAAACACAAAAACCGTCACATTGCTTCTGTGGCAACAACAACAACAAGCGTATCAAACAAGAGGGATCATGGTTCTTCCTCTAGGTTGCAAGATAATGTGACGATGGCTGGCAATGAGTCACCATTAAACCCTATTCCTCCTCCGCCACCACTGCCGCCGTTCAAGTTGCCGGGGTGGAAGTTCCGGGTGCAGGGTGACTTTGTTAGGGTAGACAGCATGGGTAGTTCACGTAGTGGATCACCTGATGATTTGGATGAAGTTAGTGTGGACACACCGACAACTAGTACTCATGATGAAACAAGCCAAGTCAATAGTCCTTTTGCCAAAGACAGTGAAGATTCTGCAAGTGTGAGTGCACCCTCATTGTTCTGTCCTAGCCCTGATGTTGATACCAAGGCTCACAACTTCATTGAGAGCTTCAGGGCTGGTTTGAGGATGGCGAAGATGAACTCCATGAAGGAGAGGCAGGGGATTGGGAGGTCCAATCTAGCCCCTTCACCAAACCATGAATGGAACTAG 1773 0.4941 MDQQEGNTWTMPPFWAVEQRNRRRLRRSYSLLLTSTSLLVLFLVLVLVFSLIVVPTLHSFASNIFKPRTVKNSWDSLNLVLVLFAIFCGFLSRNNNTSETLTPRSRRTFSNPSTPPSAWYQNDYSQIHNRSFNRLRSFNSYPDLRQQIAADERFRFYDDTYLLRHRNMRTETEEEEEKEIGIDNVATAPPQSPPQQGMEAVGRNVKRAYQVETVEEHKKEDLDAQISPPPPATRSKGVRRNVKRTYQAEAVEKHETNDFPVMDSRPPPVTITKGVRRNAKRTYQPETMEKRETNDFDEQNSQTLPSPPPPPVTRRRGVRRNAKPEGNDSVVKSSPPPPPPPPPLPAEEARTVSGKKKRGSATKEFLISLRGKKKKQRQRSVENFDIILGSESLFSQPPPPPPLPPPKVFQNLFSLKKGKHKNRHIASVATTTTSVSNKRDHGSSSRLQDNVTMAGNESPLNPIPPPPPLPPFKLPGWKFRVQGDFVRVDSMGSSRSGSPDDLDEVSVDTPTTSTHDETSQVNSPFAKDSEDSASVSAPSLFCPSPDVDTKAHNFIESFRAGLRMAKMNSMKERQGIGRSNLAPSPNHEWN* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0308 590 PANTHER COTTON FIBER (DUF761) 129 585 - -
Gso7g0308 590 PANTHER COTTON FIBER (DUF761) 1 122 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 418 466 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 489 539 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 573 590 - -
Gso7g0308 590 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 122 - -
Gso7g0308 590 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 129 585 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 489 549 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 350 371 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 569 590 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 242 260 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 331 347 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 170 201 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 425 457 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 215 383 - -
Gso7g0308 590 MobiDBLite consensus disorder prediction 279 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0308 Gso-Chr7 2833642 2835414 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0308 - - gmx:100799093 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0308 7 2833642 2835414 Gso7g0308 7 2833642 2835414 ECH
Gso15g0238 15 2177131 2179150 Gso7g0308 7 2833642 2835414 PCT