Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0132 ATGGCCTCTTACAGGCCCTTCCCTCCTCAATCGAGTCAAATTCCAAACCCTATCCCAGGTGGGAATCATCAGTATAATAATAATCAAAATCAAAATTGGGGTGCTTATGGAGATCCCTCTACTTCTTCATTCCCCCAAATCCCTCCAAATTCCAATTATCATCAAAATCAACAACATCATGTTCCATATGCACCTCCAAATCCCCACCACCCTCACTATCCATATCCACCACCACCTCCGCCGCCGCCACCGGAGGCTTCATACCAGCCTCCACCACCACCACCACCAGCTCCTATGTATTATCCCTCTAATAATCAGTATAGCAACCAGCCACCTCCACCGCCGCCGCCCTTGTCCCCACCACCACCACCTCCCCCGGTTTCGCCCCCTCCTCCTCCCCCGGTAACTCAGAACAACGAAGAGCGGCACTTCAAGGAGCCTTCCACGTCCGGCCGGCGTGAATACGAGCATTCCAATCACGGCATTGCTCACAAGCAGCACAAGCAGCAGCCTCCTGTGCCAGTGAAGAAGATGAACAACGGGCCTCCTGGCAGGGCTGAGACCGATGAAGAGAAGAGGTTGAGGAAAAAGAGGGAGTTTGAGAAGCAGAGGCAGGAGGAAAAGCATAGGCAGCAGCTCAAGGAGTCCCAGAACACTGTTCTGCAGAAGACTCACATGTTGTCCTCTGGGAAGGGGCACGGCATGATTGCAGGGTCTCGAATGGGAGAAAGGAGATCTACTCCCTTGTTGGGTGCTGAGAGGGTTGAAAATAGGTTGAAGAAGCCCACAACGTTTTTGTGTAAGCTCAAATTTCGAAATGAACTTCCAGATCCAAGTGCTCAACCTAAGCTTATGGCCTCCAAAAAAGATAAAGATCAATATGCAAAATATACAATCACATCTCTGGAGAAAATGTACAAACCCAAGCTTTTTGTGGAGCCAGATCTAGGGATACCTCTAGATCTTCTTGATCTCAGTGTTTACAATCCTCCCAGTGTCAGACCACCTCTTGCTCCAGAAGATAAAGAATTGTTGCGAGATGATGAAGCTGTTACTCCTATTAAAAAAGATGGCATAAAAAGAAAAGAGAGGCCTACTGATAAAGGTGTTGCATGGCTTGTCAAAACACAATATATATCTCCTCTAAGCATGGAGTCAACAAAGCAGTCTTTAACTGAGAAACAAGCTAAGGAGCTGAGAGAGATGAAAGGAGGTCGTGGCATTTTGGACAATCTCAACAGTAGGGAAAGACAAATCAGGGAAATTGAAGCATCATTTGAAGCAGCTAAGTCTGATCCTGTTCATGCAACCAACAAAGATTTGTATCCTGTTGAGGTTATGCCGTTGCTGCCTGATTTTGATAGGTATGATGATCAGTTTGTTGTTGCTGCATTTGATAATGCTCCAACAGCTGATTCAGAAATGCATGCTAAGATGGACAAATCTGTTCGTGATGCCTTTGAATCAAAGGCAGTTATGAAAAGTTACGTTGCAACGGGTTCTGATCCTGCTAACCCTGAGAAGTTTTTGGCTTATATGGTCCCAGCACCAGGAGAGCTGTCAAAGGATATATATGATGAAAATGAAGATGTCTCGTACTCTTGGATACGCGAGTATCATTGGGATGTTCGGGGTGATGATGCAGATGATCCCGCAACATTCTTAGTTGCATTTGATGAGTCCGAAGCACGCTACTTGCCTCTTCCAACTAAACTTGTTTTAAGAAAAAAGAGGGCAAAAGAGGGAAGATCAGGTGATGAGGTTGAGCAATGTCCAGTACCTGCAAGAGTGACTGTAAGGCGAAGGTCTAGTGTTGCTGCAATTGAGCGGAAGGATTCTGGGGTATATACAAGTTCAAAGGGAAATTCCTCGAAAAGAGGTGGCTTAGAAATGGATGATGGTCTCGAAGACCAACATAGAGGTGCACCACACCAGGACAACTATCAGTCTAGTGGAGCAGAAGATTACATGTCTGATTGA 1980 0.4611 MASYRPFPPQSSQIPNPIPGGNHQYNNNQNQNWGAYGDPSTSSFPQIPPNSNYHQNQQHHVPYAPPNPHHPHYPYPPPPPPPPPEASYQPPPPPPPAPMYYPSNNQYSNQPPPPPPPLSPPPPPPPVSPPPPPPVTQNNEERHFKEPSTSGRREYEHSNHGIAHKQHKQQPPVPVKKMNNGPPGRAETDEEKRLRKKREFEKQRQEEKHRQQLKESQNTVLQKTHMLSSGKGHGMIAGSRMGERRSTPLLGAERVENRLKKPTTFLCKLKFRNELPDPSAQPKLMASKKDKDQYAKYTITSLEKMYKPKLFVEPDLGIPLDLLDLSVYNPPSVRPPLAPEDKELLRDDEAVTPIKKDGIKRKERPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMKGGRGILDNLNSRERQIREIEASFEAAKSDPVHATNKDLYPVEVMPLLPDFDRYDDQFVVAAFDNAPTADSEMHAKMDKSVRDAFESKAVMKSYVATGSDPANPEKFLAYMVPAPGELSKDIYDENEDVSYSWIREYHWDVRGDDADDPATFLVAFDESEARYLPLPTKLVLRKKRAKEGRSGDEVEQCPVPARVTVRRRSSVAAIERKDSGVYTSSKGNSSKRGGLEMDDGLEDQHRGAPHQDNYQSSGAEDYMSD* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0132 659 PANTHER RNA POLYMERASE II ASSOCIATED FACTOR PAF1-RELATED 241 657 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 602 659 - -
Gso7g0132 659 Pfam Paf1 265 590 IPR007133 GO:0006368|GO:0016570|GO:0016593
Gso7g0132 659 SUPERFAMILY Formin homology 2 domain (FH2 domain) 117 220 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 64 137 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 626 643 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 16 62 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 183 214 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 139 163 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 1 255 - -
Gso7g0132 659 Coils Coil 412 432 - -
Gso7g0132 659 MobiDBLite consensus disorder prediction 644 659 - -
Gso7g0132 659 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 241 657 IPR007133 GO:0006368|GO:0016570|GO:0016593
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0132 Gso-Chr7 1231167 1235468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0132 K15174 - gmx:100800148 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0132 7 1231167 1235468 Gso7g0132 7 1231167 1235468 ECH
Gso7g0132 7 1231167 1235468 Gso8g1669 8 16334528 16338892 GST