LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g0119	ATGGCCAGTATTCTGTGTCCTTCTTTAACCATAGTCACGTCCTATGCATTCAGCAATGAACCAAAACTTGTCTCTAAATTCACTGCAGTAACAGGAAACTCTTACTCACCACTATGGCTTTCTTGTACACGCCCTGGAAATCCAGCTAGAAACCATTTTCAGCTCAAATCCTCAAATGGGCTTCCGCAAAATGCTGTTTCTTCTAATGACGGTTTAGCTGGAAGTTCATTGGCCAAAGAAGATGGCAAGCCCCAACCACTTGAAGGACCATTTCCCTTTCCAGATTCAGAATATACCGGATCCAACCTTAGTATAACTGTTGTTGGAGCTTCTGGAGACCTTGCTAAAAAGAAGATTTTTCCAGCACTCTTTGCTCTTTTTTATGAAGATTGGCTACCTGAGAATTTTCTTGTGTTCGGATTTGCTCGGACTAAAATGACCGATGAAGAATTAAGGAACATGATTAGCAAGACACTAACATGCAGAATTGATAAGAGGGAAAATTGCGAAGATAAAATGGATCAGTTCTTAAAAAGATGCTTTTACCATTCTGGTCAATACAATTCTGAGGACCACTTTTCAGAATTGGATAGCAAGCTGAGAGAGAAAGAGGGTGGAAAACTGTCAAACAGATTGTTTTATTTGTCAATACCTCCAAACATATTTGTGGATGTGGTGAGATGTGCTAGTCTTAAAGCTTCTTCAAAAGATGGATGGACAAGGGTTATTGTTGAAAAGCCATTTGGTCGTGACTCAGAATCATCTAGTGAGCTAACAAAGAGTTTGAAGCAGTACCTCACTGAAGATCAAATATTCAGGATTGACCATTACTTGGGTAAGGAGCTTGTGGAGAATCTATCAGTGCTTCGCTTTTCAAATCTTGTTTTTGAGCCTCTGTGGTCCCGAAATTACATTCGCAATGTGCAGATAATATTTTCTGAAGATTTTGGAACTGAAGGAAGAGGGGGTTATTTTGATCACTATGGAATCATTCGTGATATAATGCAAAATCATCTTCTGCAAATACTAGCATTGTTTGCAATGGAAACACCTGTAAGCTTGGCTGCTGAGGACATCAGAAATGAAAAGGTGAAGGTTCTGAGATCAATGAGACCACTGGAGCTTGAAAATGTTGTTGTTGGTCAATATAAGGGCCACAGCAAGGGTGGTAAATCACATCCTGCTTATACAGATGATCCAACTGTTCCAAAGGGTAGTCTTACTCCAACATTTGCAGCAGCAGCTCTTTTTATTGACAATGCCAGATGGGATGGGGTTCCTTTTCTCATGAAAGCTGGCAAGGCTCTCCATACTAAACGTGCAGAAATCAGAGTACAATTCAGACACGTCCCAGGTAACTTATACAAGAGGAATTTTGGAACTGATCTGGACAAAGCCACAAATGAGCTTGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAGATCAACAATAAAGTTCCTGGTCTTGGAATGAGATTAGACAGAAGTGACCTGAATTTGCTTTTCCGAGCAAGGTATCCAAGAGAAATACCAGATGCATATGAGAGGTTACTCTTAGATGCCATTGAAGGTGAGCGAAGGCTGTTCATTAGAAGCGATGAGCTTGATGCAGCTTGGGCACTATTCACTCCTTTGCTAAAGGAAATTGAAAACAAGAAGATTGCTCCAGAGCTCTACCCCTATGGTAGCAGAGGACCGGTTGGAGCACATTACCTTTCTGCAAAGCACAATGTAAGATGGGGAGATCTTGGTGAAGACTAA	1767	0.408	MASILCPSLTIVTSYAFSNEPKLVSKFTAVTGNSYSPLWLSCTRPGNPARNHFQLKSSNGLPQNAVSSNDGLAGSSLAKEDGKPQPLEGPFPFPDSEYTGSNLSITVVGASGDLAKKKIFPALFALFYEDWLPENFLVFGFARTKMTDEELRNMISKTLTCRIDKRENCEDKMDQFLKRCFYHSGQYNSEDHFSELDSKLREKEGGKLSNRLFYLSIPPNIFVDVVRCASLKASSKDGWTRVIVEKPFGRDSESSSELTKSLKQYLTEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRNVQIIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLAAEDIRNEKVKVLRSMRPLELENVVVGQYKGHSKGGKSHPAYTDDPTVPKGSLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKIAPELYPYGSRGPVGAHYLSAKHNVRWGDLGED*	589

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g0119	588	PANTHER	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC	97	587	-	-
	Gso7g0119	588	SUPERFAMILY	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	275	582	-	-
	Gso7g0119	588	PRINTS	Glucose-6-phosphate dehydrogenase signature	241	254	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	PRINTS	Glucose-6-phosphate dehydrogenase signature	265	293	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	PRINTS	Glucose-6-phosphate dehydrogenase signature	317	334	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	PRINTS	Glucose-6-phosphate dehydrogenase signature	335	351	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	PRINTS	Glucose-6-phosphate dehydrogenase signature	422	448	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	PANTHER	GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD	97	587	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	ProSitePatterns	Glucose-6-phosphate dehydrogenase active site.	275	281	IPR019796	GO:0004345\|GO:0006006
	Gso7g0119	588	MobiDBLite	consensus disorder prediction	70	91	-	-
	Gso7g0119	588	Gene3D	-	99	273	-	-
	Gso7g0119	588	Pfam	Glucose-6-phosphate dehydrogenase, NAD binding domain	107	285	IPR022674	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	Hamap	Glucose-6-phosphate 1-dehydrogenase [zwf].	102	584	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	99	288	IPR036291	-
	Gso7g0119	588	Gene3D	Dihydrodipicolinate Reductase; domain 2	274	583	-	-
	Gso7g0119	588	TIGRFAM	zwf: glucose-6-phosphate dehydrogenase	103	583	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	PIRSF	G6PD	85	586	IPR001282	GO:0006006\|GO:0016614\|GO:0050661
	Gso7g0119	588	Pfam	Glucose-6-phosphate dehydrogenase, C-terminal domain	288	582	IPR022675	GO:0004345\|GO:0006006\|GO:0050661

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g0119	Gso-Chr7	1078856	1083879	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g0119	K00036		-	gmx:100801945	1180.62

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0119	7	1078856	1083879	Gso8g1644	8	16086828	16088004	GST