Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2539 ATGTTTAACCAAACCAAACCAAACAGCTACCCCACCTTCTTCATTATTATTAATATAATCGTTAATTTCAACGACAACCATTTTCTATTTTCTAGTCACAGAACACAACAACCTTCCTCCTTCCTCTTTCCTGTGTTGTTGTGTGCTGCTATGGGGCGAGGGCTGGGTGTTGTGCTGGTGTTGTTGGCCGTGTACTGTGGGCTGGACCCGTTCCAGCACAGCCCAATAGCCCACTTCCCGGACTTCGAGGTCAAGAGGGTCGACATGCCCGCATGGTCCGAGGTTCCCACCGACCAAGACAAGCACAATTTGTTGCAGAAGTCAGAGATTAAGTTCGCGAATCAGGTGCAGGGACCAGAAAGCATTGCCTTCGACCCTCTTGGTCGTGGCCCTTATACTGGTCTCGCCGATGGAACAATCGTCTTCTGGAATGGTCACTCCTGGCTTCACTTCGCTTATACCTCCCCCAACAGATCAGAGATATGTAATCCTATTGCATCTGCAACACCATTTAGTTATGTGAAGAATGAGCATATCTGTGGAAGGCCTTTGGGACTCAGATTTGACAAGAAAACAGGTGATTTGTATATTGCAGATGCATATTTTGGGCTCCTGAAGGTAGGACCCGAGGGTGGTTTAGCAACATCTCTTGTAACTGAGGCTGAAGGGATTCCATTGAGATTTACGAATGATGTTGATGTTGATACGGAAGGGAATGTTTATTTTACGGAAAGCAGTGCTCTTTATCCAAGGAGGAATTTCCTTCAGCTGGTATTTTCTGGGGATGATAGTGGCAGGGTTTTGAAATACAACCTTGCCACTAAGGAAACCACTGTTCTTGTGAGGAACATTCAATTCCCAAATGGCATTTCCTTGAGCAAGGATGGTTCCTTCTTTGTCTTTTGTGAAGGGGTTGTTGGCAGGTTACGTAAATACTGGCTGAAAGGAGAAAAAGCTGGAACTTCAGAGATTTTAGCCATCCTACCTGGATATCCTGACAATGTGAGAGTCAATGAAGATGGTGATTTTTGGGTAGCTCTTCATTCTAGAAGGTATATGTATGCATACTACAATGGTATCTACCCAAAGATGAGGAAAATAATACTCAAGCTTCCTATACCAATAAAGATTCATTACCTGCTTCAAATCGGGGGTCGCCAACACGCAGCGGTTATCAGGTATAGCCCTGAAGGTAAACTTTTGCAGATTTTGGAGGACAGTGAGGGGAAAGTTGTTAAAGCAGTGAGTGAAGTGGAGGAGAAGGATGGTAAACTTTGGATGGGAAGTGTTCTCATGCCTTTTGTTGCAGTATACAACTTGAAATGA 1326 0.4449 MFNQTKPNSYPTFFIIINIIVNFNDNHFLFSSHRTQQPSSFLFPVLLCAAMGRGLGVVLVLLAVYCGLDPFQHSPIAHFPDFEVKRVDMPAWSEVPTDQDKHNLLQKSEIKFANQVQGPESIAFDPLGRGPYTGLADGTIVFWNGHSWLHFAYTSPNRSEICNPIASATPFSYVKNEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLATSLVTEAEGIPLRFTNDVDVDTEGNVYFTESSALYPRRNFLQLVFSGDDSGRVLKYNLATKETTVLVRNIQFPNGISLSKDGSFFVFCEGVVGRLRKYWLKGEKAGTSEILAILPGYPDNVRVNEDGDFWVALHSRRYMYAYYNGIYPKMRKIILKLPIPIKIHYLLQIGGRQHAAVIRYSPEGKLLQILEDSEGKVVKAVSEVEEKDGKLWMGSVLMPFVAVYNLK* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2539 441 Pfam Strictosidine synthase 230 317 IPR018119 GO:0009058|GO:0016844
Gso6g2539 441 Gene3D - 102 441 IPR011042 -
Gso6g2539 441 PANTHER STRICTOSIDINE SYNTHASE-RELATED 55 440 - -
Gso6g2539 441 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 55 440 - -
Gso6g2539 441 Pfam Strictosidine synthase-like, N-terminal 115 142 - -
Gso6g2539 441 SUPERFAMILY Calcium-dependent phosphotriesterase 96 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2539 Gso-Chr6 47112859 47116090 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2539 - - gmx:100803331 860.136