Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2516 ATGGCTAAGAGCTCATTCAAGATGGAACACCCACTTGAGAGGAGGCAGGCTGAAGCATCTCGGATAAGGGAGAAGTATCCCGAAAGAATTCCAGTAATTGTTGAAAGGGCAGAGAAGAGTGATGTTCCTGAAATTGATAAGAAAAAGTATCTGGTCCCTGCTGATTTGACTGTTGGCCAGTTTGTGTATGTGGTGCGGAAGAGAATCAAGCTGAGTCCCGAGAAGGCCATCTTCATTTTTGTTAAGAATATTTTGCCACCAACTGCGGCAATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGATTTCTATACATGACTTACAGTGGAGAGAACACATTTGGGCTTGTGTTCTGA 363 0.4298 MAKSSFKMEHPLERRQAEASRIREKYPERIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGLVF* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2516 120 Pfam Autophagy protein Atg8 ubiquitin like 14 117 IPR004241 -
Gso6g2516 120 PANTHER AUTOPHAGY-RELATED PROTEIN 1 117 - -
Gso6g2516 120 MobiDBLite consensus disorder prediction 1 21 - -
Gso6g2516 120 SUPERFAMILY Ubiquitin-like 3 117 IPR029071 -
Gso6g2516 120 CDD Ubl_ATG8 12 114 - -
Gso6g2516 120 Gene3D - 1 118 - -
Gso6g2516 120 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 1 117 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2516 Gso-Chr6 46912008 46914169 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2516 K08341 - gmx:100500165 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0809 12 8502643 8504865 Gso6g2516 6 46912008 46914169 GST