Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2491 ATGGCTGCATCATTATTTATGCCTTCATCCATAGTGGAGGAAGAAGCGAGGTTCGAAGCCGAAGTGGCGGAGGTGCAAGCATGGTGGAACTCTGAGAGGTTCAGGCTAACAAAAAGGCCATACACAGCAAGAGATGTAGTGTCCCTCCGAGGCAACCTCAGACAAACCTATGCCTCGAACGAGATGGCGAAAAAGCTATGGCGCCTCCTGAAGAACCACCAAGCTAATGGAACAGCCTCGAGGACTTTTGGTGCACTTGATCCTGTTCAGGTCACCCAAATGGCCAAGCACTTGGATACAATCTATGTCTCAGGGTGGCAGTGTTCAGCCACACACACCACGAGCAACGAGCCCGGTCCTGACCTTGCTGATTACCCTTATGACACTGTCCCAAACAAGGTTGAGCACCTCTTCTTTGCTCAGCAGTACCATGACAGGAAGCAAAAAGAGGAGAGGATGAGAATGAGCAGGGAAGAGAGGGCAAGGACACCTTATGTTGATTACTTGAGGCCAATCATAGCTGATGGTGACACTGGCTTTGGTGGCACCACAGCAACTGTCAAGCTATGCAAGCTCTTTGTTGAGAGAGGTGCTGCTGGAATCCACATTGAGGACCAGTCTTCAGTGACCAAAAAATGTGGTCACATGGCTGGGAAAGTGCTTGTTGCCATCAGTGAACACATCAACAGGCTTGTGGCTGCAAGGCTTCAGTTTGATGTCATGGGGGTGGAAACTGTTCTGGTGGCAAGAACAGATGCAGAAGCTGCTAATTTGATTCAATCAAACATTGACACAAGGGACCATCAATTTATCTTGGGAGTGACCAACCCCAACCTTAAGGGGAAGAGCTTAGCAACTCTTATGCAACAAGGCATGGCTGCTGGAAAAAATGGAGCTGAGCTTCAGGCTTTGGAGGATGAGTGGCTCTCAAAGGCACAGTTGAAGACTCTCTCAGAAGCAGTTGTGGAGGCAATTGAGAGGCAGAACAACATTGGAGAGGAAGAAAAAAGAAGGAAGCTAAATGAGTGGATGCACCATTCAAGCTATGAAAGGTGCCTTTCTAATGAGGAAGGTAGGGAAATTGCTGAAAAGTTAGGAGTGAGAAACCTCTTTTGGGATTGGGACTTGCCTAGGACTAGAGAAGGTTTTTATAGGTTCAAAGGTTCTGTGACTGCATCAGTTGTTAGAGGTTGTGCTTTTTCTCCACATGCTGATGTTATATGGATGGAGACTGCAAGCCCAAATGTGGTTGAGTGCACAGAGTTTTCCGAGGGGGTTAGGTCAAAGCACCCTCAGATGATGCTTGGATACAACCTCTCTCCATCTTTCAACTGGGATGCTTCTGGAATGAGTGATGAACAAATGAAGGATTTCATTCCAAAGATTGCAAAGTTGGGGTATGTGTGGCAGTTCATCACTGTGGGAGGTCTTCATTCTAATGCACTCATAACTTCAACATTTGCAAGGGATTTTGCCAATAGGGGAATGCTGGCTTATGTGGAGAGGATTCAGAGAGAGGAGAGGAACAATGGGGTTGACACACTAGCTCACCAAAAATGGGCTGGTGCTAACTACTATGATAGGTACCTCAAGACTGTCCAGGGAGGTGTGGCTTCAACTGCTGCAATGGGAAAAGGAGTAACTGAAGAGCAGTTTAAAGAATCATGGACTAGATCAGGAGCTGTAAACATTGATAGAGGCAGTATTGTGGTTGCTAAGGCCAGAATGTGA 1731 0.4702 MAASLFMPSSIVEEEARFEAEVAEVQAWWNSERFRLTKRPYTARDVVSLRGNLRQTYASNEMAKKLWRLLKNHQANGTASRTFGALDPVQVTQMAKHLDTIYVSGWQCSATHTTSNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQKEERMRMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVERGAAGIHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAANLIQSNIDTRDHQFILGVTNPNLKGKSLATLMQQGMAAGKNGAELQALEDEWLSKAQLKTLSEAVVEAIERQNNIGEEEKRRKLNEWMHHSSYERCLSNEEGREIAEKLGVRNLFWDWDLPRTREGFYRFKGSVTASVVRGCAFSPHADVIWMETASPNVVECTEFSEGVRSKHPQMMLGYNLSPSFNWDASGMSDEQMKDFIPKIAKLGYVWQFITVGGLHSNALITSTFARDFANRGMLAYVERIQREERNNGVDTLAHQKWAGANYYDRYLKTVQGGVASTAAMGKGVTEEQFKESWTRSGAVNIDRGSIVVAKARM* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2491 576 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 12 536 IPR015813 GO:0003824
Gso6g2491 576 Gene3D - 262 378 - -
Gso6g2491 576 Coils Coil 322 342 - -
Gso6g2491 576 Gene3D - 17 536 IPR040442 -
Gso6g2491 576 TIGRFAM isocit_lyase: isocitrate lyase 22 552 IPR006254 GO:0004451|GO:0019752
Gso6g2491 576 Pfam Isocitrate lyase family 21 552 IPR006254 GO:0004451|GO:0019752
Gso6g2491 576 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 13 555 IPR006254 GO:0004451|GO:0019752
Gso6g2491 576 CDD ICL_PEPM 66 257 IPR039556 GO:0003824
Gso6g2491 576 PIRSF ICL 12 302 IPR006254 GO:0004451|GO:0019752
Gso6g2491 576 PIRSF ICL 369 555 IPR006254 GO:0004451|GO:0019752
Gso6g2491 576 ProSitePatterns Isocitrate lyase signature. 211 216 IPR018523 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2491 Gso-Chr6 46670594 46674555 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2491 K01637 - gmx:100789036 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0828 12 8833279 8836924 Gso6g2491 6 46670594 46674555 GST