Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2475 ATGAGACACACTCATCCACTGCGTCCCCCACCACGCGCCGAGGAAGCCGCACCTCCGCTTCCCCAAATCCACTGCGACTTCTCCTCCACGCGCCTCTGGGCCGCCAAGGTCCTCTCCTTCTCCCTCCTCTTCCGCGACCACCTCCTCCTGCGCGCCGCCGCCTTCAACCACTCCCGCGTCCTCTGCGTCTCCGCTGGCTCCGGCCACGAGGTCGCCGCGCTCCGCCGCCTCGGCATCGACGACGTCACCGGCGTCGAGATCCTCGAGTCCCCGCCGCTCGTCCGCCGCGCCGATCCGCGCAACCTCCCGTTCTTCGACGGCGTGTTCGACCTCGCCTTCACCGCGCGGTTCGACGAGGCGCTGTTCGCCGCCGAGATGGAGCGCGTGATCCGGCCTGGCGGCGCGTGCGTTGTTCTCGTGGCGGAGTCTGGGGAGGATGAGGTGAGGGAGGTTGTTGGATTATTTAGGAATTCGAGGCTTGTTAGGTGGAGTAATGTTTCTGACTGGAATGAGAATGACCAGTGTTCTTTTGAGAACTAG 540 0.6481 MRHTHPLRPPPRAEEAAPPLPQIHCDFSSTRLWAAKVLSFSLLFRDHLLLRAAAFNHSRVLCVSAGSGHEVAALRRLGIDDVTGVEILESPPLVRRADPRNLPFFDGVFDLAFTARFDEALFAAEMERVIRPGGACVVLVAESGEDEVREVVGLFRNSRLVRWSNVSDWNENDQCSFEN* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2475 179 CDD AdoMet_MTases 59 134 - -
Gso6g2475 179 Gene3D Vaccinia Virus protein VP39 46 178 IPR029063 -
Gso6g2475 179 MobiDBLite consensus disorder prediction 1 20 - -
Gso6g2475 179 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 45 157 IPR029063 -
Gso6g2475 179 PANTHER F21J9.14 27 167 - -
Gso6g2475 179 Pfam Methyltransferase domain 62 138 IPR013216 GO:0008168
Gso6g2475 179 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 27 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2475 Gso-Chr6 46466122 46466742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2475 - - gmx:100779766 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0846 12 9246487 9247269 Gso6g2475 6 46466122 46466742 GST