Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2348 ATGAAATCACGTCCTTTGCACATAGCAATGTATCCATGGCTGGCCATGGGTCACCAAACCGCATTCCTCCACCTATGCAACAAGTTAGCCATTAGGGGCCACAAAATCTCCTTCATCACCCCACCAAAAGCACAAGCCAAGTTAGAACCATTCAACTTGCACCCAAATTCAATCACCTTTGTCACCATCAATGTTCCACACGTTGAAGGCCTTCCTCCAGATGCACAAACAACAGCAGATGTCACTTACCCTTTGCAGCCACAGATCATGACAGCCATGGATCTCACCAAAGATGACATAGAAACCCTTCTCACTGGCCTCAAACCTGACCTTGTCTTCTATGACTTCACACATTGGATGCCAGCCCTAGCAAAGCGTTTAGGCATCAAGGCTGTGCACTATTGTACTGCTAGCTCTGTCATGGTTGGTTACACTCTCTCACCGGTTAGATTTCACCAAGGAACAGACCTAATGGAAAGTGATCTCATGGAACCCCCAGAAGGGTACCCTGACTCATCAATCAAGCTCCAAACTCACGAGGCTCGTGCCTTTGCTGCAAAAAGAAAGGATACATTTGGGAGCAATGTTCTCTTCTACGATCGCCAATTCATTGCATTGAATGAAGCCGATTTGTTGGCATACAGAACATGCAGAGAAATAGAAGGGCCATATATGGATTACATTGGAAAGCAGTTCAACAAGCCAGTGGTAGCAACCGGGCCAGTTATTCTAGACCCACCAACTTTAGATTTGGAGGAGAAATTTTCAACATGGCTTGGAGGGTTTGAGCCTGGCTCTGTAGTTTATTGTTGCTTTGGAAGTGAGTGCACTTTGAGGCCAAACCAGTTCCTAGAGCTTGTGCTTGGTCTTGAACTCACAGGCATGCCATTCTTGGCAGCAGTGAAGGCCCCATTAGGGTTTGAGACAGTGGAATCAGCAATGCCTGAAGGGTTTCAAGAGAGGGTCAAAGGGAGAGGATTTGTGTATGGTGGATGGGTTCAGCAGCAGTTGATTCTTGCACACCCTTCTGTAGGGTGTTTCATCACACATTGTGGATCAGGGTCCTTGTCTGAGGCATTGGTGAACAAGTGTCAGTTGGTGCTGTTGCCTAATGTTGGTGACCAGATCCTCAATGCAAGGATGATGGGGACCAACTTGGAGGTTGGTGTGGAAGTGGAGAAGGGTGATGAGGATGGAATGTACACCAAGGAGAGTGTGTGTAAAGCTGTGAGCATTGTGATGGATTGTGAGAATGAAACCAGCAAAAGGGTTAGGGCTAATCATGCTAGGATCAGAGAGTTGCTGCTTAACAAAGATTTGGAGTCATCTTATGTTGACAGTTTCTGCATGAGGCTTCAAGAGATTGTAGAGGGAATTTGA 1380 0.4652 MKSRPLHIAMYPWLAMGHQTAFLHLCNKLAIRGHKISFITPPKAQAKLEPFNLHPNSITFVTINVPHVEGLPPDAQTTADVTYPLQPQIMTAMDLTKDDIETLLTGLKPDLVFYDFTHWMPALAKRLGIKAVHYCTASSVMVGYTLSPVRFHQGTDLMESDLMEPPEGYPDSSIKLQTHEARAFAAKRKDTFGSNVLFYDRQFIALNEADLLAYRTCREIEGPYMDYIGKQFNKPVVATGPVILDPPTLDLEEKFSTWLGGFEPGSVVYCCFGSECTLRPNQFLELVLGLELTGMPFLAAVKAPLGFETVESAMPEGFQERVKGRGFVYGGWVQQQLILAHPSVGCFITHCGSGSLSEALVNKCQLVLLPNVGDQILNARMMGTNLEVGVEVEKGDEDGMYTKESVCKAVSIVMDCENETSKRVRANHARIRELLLNKDLESSYVDSFCMRLQEIVEGI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2348 459 ProSitePatterns UDP-glycosyltransferases signature. 332 375 IPR035595 -
Gso6g2348 459 PANTHER GLYCOSYLTRANSFERASE 2 455 - -
Gso6g2348 459 CDD GT1_Gtf-like 6 433 IPR002213 GO:0008194
Gso6g2348 459 Gene3D Glycogen Phosphorylase B; 1 254 - -
Gso6g2348 459 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 415 IPR002213 GO:0008194
Gso6g2348 459 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 441 - -
Gso6g2348 459 Gene3D Glycogen Phosphorylase B; 255 437 - -
Gso6g2348 459 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 2 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2348 Gso-Chr6 44950963 44953260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2348 6 459 Glycosyltransferase AT5G54010 45.495 5.33e-150 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2348 K22794 K12933 gmx:100787444 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0997 12 12712547 12714952 Gso6g2348 6 44950963 44953260 GST