Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2269 ATGGGTTCCATGGGCAAAAAGCAGCACATTTTAGCTCTTGTGCTCCTTCTCTCAATCTGCACTTCCCAAGTAATGTCCCGCAACCTCCATGAGGCATCCATGTCCGAAAGACATGAGCAGTGGATGAAGAAATATGGGAAGGTATATAAGGATGCTGCAGAGAAGCAAAAACGTTTACTGATATTCAAGGATAATGTTGAATTCATTGAATCCTTCAATGCTGCCGGGAACAAACCTTACAAGCTTAGCATCAATCACCTAGCTGACCAAACCAATGAGGAATTTGTGGCTTCCCATAATGGATACAAATACAAGGGATCACATTCACAAACACCATTCAAGTATGGAAACGTTACTGATATTCCTACTGCAGTGGATTGGAGGCAAAATGGAGCTGTTACTGCAGTCAAGGACCAAGGCCAATGTGGTAGCTGCTGGGCATTTTCAACAGTTGCTGCAACAGAAGGTATCTACCAGATAAGTACAGGTATGCTAATGTCCCTTTCAGAGCAAGAGTTAGTGGATTGCGACAGCGTGGATCATGGTTGTGATGGAGGTCTCATGGAAGATGGGTTTGAATTCATTATTAAAAATGGTGGAATCAGCAGTGAGGCAAACTACCCTTACACAGCAGTTGATGGAACTTGTGATGCAAGCAAAGAGGCTTCTCCAGCAGCTCAAATAAAGGGCTATGAAACAGTACCTGCTAACAGTGAGGAGGCACTGCAGCAAGCAGTTGCAAACCAACCAGTGTCGGTTTCCATTGATGCTGGAGGATCTGGTTTCCAATTCTACTCAAGTGGGGTTTTCACAGGACAATGTGGGACTCAGCTAGACCATGGTGTTACTGTTGTTGGTTATGGTACCACTGATGATGGTACTCATGAGTATTGGATAGTGAAGAACTCATGGGGCACACAATGGGGTGAAGAAGGATACATAAGAATGCAACGAGGCATAGATGCCCAAGAAGGCCTTTGTGGCATTGCCATGGATGCCTCGTACCCAACTGCTTAG 1017 0.4494 MGSMGKKQHILALVLLLSICTSQVMSRNLHEASMSERHEQWMKKYGKVYKDAAEKQKRLLIFKDNVEFIESFNAAGNKPYKLSINHLADQTNEEFVASHNGYKYKGSHSQTPFKYGNVTDIPTAVDWRQNGAVTAVKDQGQCGSCWAFSTVAATEGIYQISTGMLMSLSEQELVDCDSVDHGCDGGLMEDGFEFIIKNGGISSEANYPYTAVDGTCDASKEASPAAQIKGYETVPANSEEALQQAVANQPVSVSIDAGGSGFQFYSSGVFTGQCGTQLDHGVTVVGYGTTDDGTHEYWIVKNSWGTQWGEEGYIRMQRGIDAQEGLCGIAMDASYPTA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2269 338 SMART pept_c1 121 337 IPR000668 GO:0006508|GO:0008234
Gso6g2269 338 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 278 288 IPR025660 -
Gso6g2269 338 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 20 337 - -
Gso6g2269 338 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 139 150 IPR000169 -
Gso6g2269 338 SMART Inhibitor_I29_2 38 95 IPR013201 -
Gso6g2269 338 Pfam Papain family cysteine protease 121 337 IPR000668 GO:0006508|GO:0008234
Gso6g2269 338 Gene3D Cysteine proteinases 16 338 - -
Gso6g2269 338 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 297 316 IPR025661 -
Gso6g2269 338 PANTHER PEPTIDASE C1A, CYSTEINE PEPTIDASE, ASPARAGINE ACTIVE SITE PROTEIN-RELATED 20 337 - -
Gso6g2269 338 CDD Peptidase_C1A 122 336 IPR039417 -
Gso6g2269 338 Pfam Cathepsin propeptide inhibitor domain (I29) 38 95 IPR013201 -
Gso6g2269 338 SUPERFAMILY Cysteine proteinases 30 337 IPR038765 -
Gso6g2269 338 PRINTS Papain cysteine protease (C1) family signature 139 154 IPR000668 GO:0006508|GO:0008234
Gso6g2269 338 PRINTS Papain cysteine protease (C1) family signature 280 290 IPR000668 GO:0006508|GO:0008234
Gso6g2269 338 PRINTS Papain cysteine protease (C1) family signature 297 303 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2269 Gso-Chr6 43833743 43835160 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2269 - - gmx:100807398 691.034