Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2240 ATGGCGATTCGTGCGTTGCTCGGAGCAATCAAGAAACGCACCGTTTCGTTCCCCGCATTCCGCGGCCATTCCATTTATCGACACGGTAGCACGCTTGTGGTGGCGGAACACGAAGGTGGTTTTATCAAACCCCCTTCTCTCTCAGCCTTGGCTGCTGCCACGTGTCTTCCCGATCCTGACTCTTCCGTTTCTGTGCTCTTGGCCGGTTCGGGTCCTTCTCTTCATCAAGCTGCTTCACATGCTGCTTCGTGCCACCCTTCAATCTCCAAGGTGCTTGTGGCAGATTCAGATAAATTCAAGAACCCTCTGGCAGAGCCCTGGGCTAAATTAGTCCATTTGGTTCACCAGAGTGGTGGTTACTCTCATATAATTGCTGCTGCAAGTTCTTTTGGGAAAAATGTCGTGCCACGTGCGGCTGCCCTTTTAGATGTTTCTCCAATTACTGACGTTACTGGAATTTCTGATTCCAATACTTTTGTGAGGCCAATATATGCTGGAAATGCACTCTGTACTGTCCGATATACTGGTGCCAATCCTTGTATATTAACCATTAGATCCACATCTTTTCCTGTTCCTCAGAATTCAGTTGACTCAAAATCTAATGAGGCTCCAATATCTCAGGTTGACCTTTCAACCTTTGATGAAGATCTGGCCAAGTCTAGATATATATCTCAGACTTCCCAGGATGATGAACGACCAGATCTTGGGAATGCACGAATTGTAGTTACTGGGGGCCGAGCCCTAAAGAGTGCTGAGAACTTTAAATTGATAGAAGATCTAGCCAATAAACTTGGTGCTGCGGTTGGTGCGACTCGTGCTGCTGTTGATGCAGGATATGTTCCTAATGATCTCCAGGTAGGGCAAACTGGAAAGATCGTTGCTCCTGAACTCTATATGGCTTTTGGTGTATCTGGAGCTATTCAACACTTGGCAGGGATGAGGGATTCCAAGGTCATTGTTGCTGTGAACAATGATGCTGATGCTCCTATATTTCAGGTAGCTGATTATGGACTTGTAGGAGATCTGTTTGAGGTGATACCAGAGCTAATGGAGAAGCTCCCTGAGAAAAAATAA 1074 0.4637 MAIRALLGAIKKRTVSFPAFRGHSIYRHGSTLVVAEHEGGFIKPPSLSALAAATCLPDPDSSVSVLLAGSGPSLHQAASHAASCHPSISKVLVADSDKFKNPLAEPWAKLVHLVHQSGGYSHIIAAASSFGKNVVPRAAALLDVSPITDVTGISDSNTFVRPIYAGNALCTVRYTGANPCILTIRSTSFPVPQNSVDSKSNEAPISQVDLSTFDEDLAKSRYISQTSQDDERPDLGNARIVVTGGRALKSAENFKLIEDLANKLGAAVGATRAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGMRDSKVIVAVNNDADAPIFQVADYGLVGDLFEVIPELMEKLPEKK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2240 357 PANTHER ELECTRON TRANSFER FLAVOPROTEIN ALPHA 24 355 IPR001308 GO:0009055|GO:0050660
Gso6g2240 357 CDD ETF_alpha 30 193 IPR033947 -
Gso6g2240 357 PANTHER ELECTRON TRANSFER FLAVOPROTEIN SUBUNIT ALPHA, MITOCHONDRIAL 24 355 - -
Gso6g2240 357 Gene3D - 230 356 - -
Gso6g2240 357 ProSitePatterns Electron transfer flavoprotein alpha-subunit signature. 297 323 IPR018206 -
Gso6g2240 357 SUPERFAMILY DHS-like NAD/FAD-binding domain 233 353 IPR029035 -
Gso6g2240 357 Gene3D HUPs 30 229 IPR014729 -
Gso6g2240 357 SMART ETF_2 31 217 IPR014730 -
Gso6g2240 357 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 30 204 - -
Gso6g2240 357 Pfam Electron transfer flavoprotein FAD-binding domain 234 314 IPR014731 -
Gso6g2240 357 PIRSF Electra_flavoP_a 28 357 IPR001308 GO:0009055|GO:0050660
Gso6g2240 357 Pfam Electron transfer flavoprotein domain 31 210 IPR014730 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2240 K03522 - gmx:100793964 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2240 6 43323740 43328551 Gso6g2240 6 43323740 43328551 ECH