Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2239 ATGATTTCTGCTACCAAACTCAAATCCGTTGATTTTTACAGGAAAATCCCGAGAGATTTGACTGAGGCGTCGCTATCAGGAGCCGGATTATCCATAGTGGCAGCTCTGGCTATGATGTTTTTATTTGGAATGGAACTAAGTAGTTATTTGTCTGTTAGCACCTCGACATCTGTAATTGTTGACAAGAGTTCTGATGGTGACTATTTACGTATCGATTTCAATATCAGTTTTCCTGCACTCTCATGTGAGTTTGCATCAGTTGATGTGAGTGATGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAGTTCGTAAGTTTTCTATTGATTCCAATTTAAGACCCACTGGTGCTGAGTTTCATTCAGGTACAGTTGCAAATGCTGTAAAGCATGATGATGAAGTAGATGAAGAATCTGTTGAAGGTTCTTTTTCACTCACAACACATAATTTTGATAAATATGTTCATCAGTTTCCAATTACGGCTGTAAATTTTTATGCACCTTGGTGTTCTTGGTGTCAACGTTTGAAACCTTCATGGGAGAAGACGGCTAAAATTATGAAAGAGAGATATGACCCAGAAATGGATGGGCGTATTATTTTGGCAAAGGTAGATTGCACTCAAGAAGGTGATTTATGCAGGAGGAATCACATACAAGGGTATCCATCTATTCGAATCTTCCGTAAAGGAACTGATCTCAGAAGTGAACATGGGCATCATGAACATGAGTCCTATTATGGAGATCGAGATACAGAAAGCCTAGTCAAGTTTATGGAGGATTTAGTCACATCTCTCCCAACAGAATCTCAAAAGCTAGCTCTGGAGGATAAATCAAATGCTTCAGACAATGCAAAAAGGCCAGCGCCATCAGCAGGTGGATGTAGAGTAGAGGGATATGTGCGTGTGAAAAAGGTTCCAGGAAATTTGATCATCTCTGCTAGATCAGATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATTTCATAAACAACTTGTCTTTTGGAAAGAAAGTGACGCCTAGGGCCATGAGTGATGTGAAGCTCTTGATACCATACATAGGCAGCAGCCATGACAGGCTCAATGGCCGGTCATTCACCAATACTCATGATTTAGGTGCCAATGTTACTATAGAGCATTATATTCAGATAGTTAAAACAGAGGTAGTGACTAGAAACGGTTATAAATTAATTGAGGAGTACGAGTACACAGCGCACAGCAGTGTGGCACACAGTGTAGACATTCCTGCTGCGAAGTTTCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAAAACCAGAGGTCTTTTTCACATTTTATAACAAACGTCTGTGCCATTATTGGGGGTGTTTTCACGGTAGCTGGAATTTTGGACTCGATTCTGCACAACACTATTAGAATGATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1443 0.4012 MISATKLKSVDFYRKIPRDLTEASLSGAGLSIVAALAMMFLFGMELSSYLSVSTSTSVIVDKSSDGDYLRIDFNISFPALSCEFASVDVSDVLGTNRLNITKTVRKFSIDSNLRPTGAEFHSGTVANAVKHDDEVDEESVEGSFSLTTHNFDKYVHQFPITAVNFYAPWCSWCQRLKPSWEKTAKIMKERYDPEMDGRIILAKVDCTQEGDLCRRNHIQGYPSIRIFRKGTDLRSEHGHHEHESYYGDRDTESLVKFMEDLVTSLPTESQKLALEDKSNASDNAKRPAPSAGGCRVEGYVRVKKVPGNLIISARSDAHSFDASQMNMSHFINNLSFGKKVTPRAMSDVKLLIPYIGSSHDRLNGRSFTNTHDLGANVTIEHYIQIVKTEVVTRNGYKLIEEYEYTAHSSVAHSVDIPAAKFHLELSPMQVLITENQRSFSHFITNVCAIIGGVFTVAGILDSILHNTIRMMKKVELGKNF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2239 480 Gene3D Glutaredoxin 126 274 - -
Gso6g2239 480 Pfam Thioredoxin 145 258 IPR013766 -
Gso6g2239 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Gso6g2239 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Gso6g2239 480 MobiDBLite consensus disorder prediction 268 293 - -
Gso6g2239 480 CDD PDI_a_family 146 258 - -
Gso6g2239 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Gso6g2239 480 ProSiteProfiles Thioredoxin domain profile. 120 263 IPR013766 -
Gso6g2239 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Gso6g2239 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2239 Gso-Chr6 43309390 43319608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2239 - - gmx:100793435 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2239 6 43309390 43319608 Gso6g2239 6 43309390 43319608 ECH