Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2237 ATGGCTTCTTCCACCATCACCTCCTCCTTCCTAACATCACCCCCTTCATCTCTCTTCAACAAATCATCATCCCCTTCCTTCCATGCCACCCCTACTCTCCGCCCCCTCGCGCCACGCGCCTCCATGTCCGCCTCAGCGCCGCCCTACGACTTCGGATCGTTCCGGTTCGATCCGATTAGAGAGTCGATTGTGTCGCGCGAGATGACCCGCAGGTACATGATCGACATGGTCACCCACGCCGACACCGACGTCGTCATCGTTGGCGCGGGCTCCGCGGGTCTCTCGTGCGCCTACGAGCTCTCCAAAAATCCCTCCATCAACATCGCCATTGTTGAGCAGTCCGTCAGCCCCGGCGGCGGCGCCTGGCTCGGCGGCCAACTCTTCTCCGCCATGGTAGTGCGTAAGCCCGCACACCTCTTCCTAGACGAGCTCAATGTGGAGTATGACGAACAAGACAACTATGTGGTGATCAAGCACGCAGCATTGTTCACATCCACCATCATGAGCAAGCTCTTGGCCAGGCCAAACGTGAAGCTCTTCAATGCCGTGGCGGCGGAGGACTTGATTGTGAAGAACGGGAGAGTTGGTGGGGTGGTGACCAACTGGGCCTTGGTTTCATTGAACCATGACACTCAATCCTGCATGGACCCCAATGTGATGGAGGCTAAGGTGGTGGTGAGTTCTTGTGGCCATGATGGACCCTTTGGAGCCACTGGGGTGAAGAGGCTCAAGAGCATTGGGTTAATTGATAGTGTGCCTGGGATGAAGGCACTTGACATGAACAAGGCTGAGGATGCCATTGTGAGGCTCACTAGGGAGGTTGTGCCTGGCATGATTGTTACTGGGATGGAAGTTGCTGAGATTGATGGTGCTCCAAGGATGGGTCCAACATTTGGAGCAATGATGATTTCAGGGCAAAAAGCAGCCCATCTGGCTTTGAGATCATTGGGACTTCCCAATGCTTTGGATTCAGTGGGAAACGTTCATCCTGAGCTTGTCCTAGCTGCTGCTGAATCCGCTGAAATTGCTGAGGCTTAA 1038 0.5501 MASSTITSSFLTSPPSSLFNKSSSPSFHATPTLRPLAPRASMSASAPPYDFGSFRFDPIRESIVSREMTRRYMIDMVTHADTDVVIVGAGSAGLSCAYELSKNPSINIAIVEQSVSPGGGAWLGGQLFSAMVVRKPAHLFLDELNVEYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKNGRVGGVVTNWALVSLNHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGLIDSVPGMKALDMNKAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALRSLGLPNALDSVGNVHPELVLAAAESAEIAEA* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2237 345 MobiDBLite consensus disorder prediction 1 24 - -
Gso6g2237 345 Pfam Thi4 family 65 298 - -
Gso6g2237 345 TIGRFAM TIGR00292: thiazole biosynthesis enzyme 61 315 IPR002922 -
Gso6g2237 345 Gene3D - 50 80 - -
Gso6g2237 345 PANTHER THIAMINE THIAZOLE SYNTHASE 1 345 - -
Gso6g2237 345 PANTHER THIAMINE THIAZOLE SYNTHASE, CHLOROPLASTIC 1 345 - -
Gso6g2237 345 Gene3D - 81 316 IPR036188 -
Gso6g2237 345 Hamap Thiamine thiazole synthase, chloroplastic [THI4]. 1 325 IPR027495 GO:0009228
Gso6g2237 345 SUPERFAMILY FAD/NAD(P)-binding domain 41 309 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2237 Gso-Chr6 43256939 43261273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2237 K03146 - gmx:547461 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2237 6 43256939 43261273 Gso6g2237 6 43256939 43261273 ECH