Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2209 ATGCAGGAAGTGCTGAAAATGGTGAAAAGCAATGAACAAGTTGTTCCTGGAGCCAAATATTGTGTCACAGGTTCCACAGGGTATATCGGTTCATGGCTAGTGGAGGCTCTTCTTGAAAGGGGATGCACGGTTCATGCCACTGTTAGAGATCCTGCAAAGTCATTGCACCTTCTGTCTCTGTGGAAGGGTGGTGACCAATTGAGATTTTTCCAAGCGGATTTGCATGAAGAAGGAAGCTTCGATGAGGCTGTAAAAGGATGCATTGGTGTGTTCCATGTTGCTGCTTCAATGGAATTCAATGTTAGGGACAAAGAAAACAATGAGGCTTTTGTTCAAGCAAATATAACTGACCCTGCAATCAAAGGAACCATAAACCTTCTAAAGTCTTGCTTGAAATCCAATTCTGTGAAAAGGGTTGTCTTCACATCTTCCATTAGTACCATTACTGCCAAAGACATCAACGGAAAGTGGAAATCTATTGTTGATGAATCTTGCCAAATCCACCCTGACACTGTATGGAACACACAAGCAAGTGGATGGGTTTATGCACTTTCAAAGCTTCTCACAGAAGAAGCAGCATTTCAATTTGCTAAAGAGAACGGCATTGATCTTGTGTCAGTCATATCAAGCACTGTTGCAGGCCCATTCTTCACTGCTAATGTACCAACAAGTGTTAAAGTTCTAGTGTCACCATTAACAGGTGAAACTGAGTACTTCAGGATATTATCTGCTGTAAATGCCCGAATGGGATCAATTGCTTTAGTTCACATTGAAGATATATGCAGTGCTCACATATTCCTAATGGAGCACGCTAAAGCAGAAGGCCGATACATATGCAGCAGCCAAAGTTGTGCATTGTCTGACTTGGCTACCCTTCTTTCCAAAGTGTATTCAAATTCAAATATCTACCAGAAGACCGAGAAAATTTATGACAAAATTCCCTCTGAGATTTCATCAAAGAAGTTACAAGATTTGGGCTTTAGTTACAAGCATGGCCTTGAAGATATAATTTATCAAACACTTATGTGTTGCCTAGACTATGGTTATTTACCTCCTGTTTAG 1062 0.4068 MQEVLKMVKSNEQVVPGAKYCVTGSTGYIGSWLVEALLERGCTVHATVRDPAKSLHLLSLWKGGDQLRFFQADLHEEGSFDEAVKGCIGVFHVAASMEFNVRDKENNEAFVQANITDPAIKGTINLLKSCLKSNSVKRVVFTSSISTITAKDINGKWKSIVDESCQIHPDTVWNTQASGWVYALSKLLTEEAAFQFAKENGIDLVSVISSTVAGPFFTANVPTSVKVLVSPLTGETEYFRILSAVNARMGSIALVHIEDICSAHIFLMEHAKAEGRYICSSQSCALSDLATLLSKVYSNSNIYQKTEKIYDKIPSEISSKKLQDLGFSYKHGLEDIIYQTLMCCLDYGYLPPV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2209 353 CDD FR_SDR_e 20 327 - -
Gso6g2209 353 Pfam NAD dependent epimerase/dehydratase family 21 273 IPR001509 -
Gso6g2209 353 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 17 341 - -
Gso6g2209 353 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 17 341 - -
Gso6g2209 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 349 IPR036291 -
Gso6g2209 353 Gene3D - 16 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2209 Gso-Chr6 42688249 42693478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2209 18 341 Miscellaneous Gene Families AT4G27250 57.273 2.12e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2209 - - gmx:100787267 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2209 6 42688249 42693478 Gso6g2209 6 42688249 42693478 ECH