Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2197 ATGAGGATTACTATTATTTCTATTACTCTTTTCCTCGTAATGACCAAACTCCTTGTGGGGGCAGAATCAATAAGCAGAGCAGATTTTCCAGAAGGGTTTGTCTTTGGAACTGCTTCTTCAGCTCACCAGTTTGAGGGAGCTACTGATGAAGGAAACAAAGGAGATAGCATATGGGATACTTTCTCAAGAATACCAGGGAGAATTGTGGACTTCAGCAATGCAGACAAGGCAGTGGATCAATACCACCGATTTCAGAATGATATAAACTTGATGAAGGATTTGGGAATGGATTCTTACAGATTTTCCATATCATGGCCGAGAATTTTTCCAAATGGAACAGGGGAACCCAATAAAGAGGGAATAAAATATTACAACAGCCTCATTGATTCTTTACTTGAAAAAGGAATCCAGCCTTTTGTAACACTATATCATTGGGATCTTCCACAGATGCTAGAAGATAAATATGAAGGATGGTTAAGCTCACAAATCATAAAAGATTATGAGCATTATGCCAATACATGCTTCAAAGCTTTTGGAGACAGAGTTAAGCACTGGATTACCTTCAATGAGCCTCATAACTTTGCACTCCATGGTTATGATTTAGGCATTCAAGCACCAGGAAGATGTTCCCTTTTGGGTCATCTTCTATGTAAGAAAGGAAAATCATCCACTGAGCCATACATTGTTGCTCATAACATTCTCTTGTCACATGCTGCTGCCTATAGAAGCTACCAACTACATTTCAAGGAACAACAAGGAGGTCAAATAGGAATAGCACTAGATGTCATTTGGTATGAACCTATAACAGAACTTGATGAAGACAAAGACGCAGCAGCAAGAGCTATGGACTTTTCACTTGGATGGTTCCTTGACCCACTTTTCTTTGGAAAATATCCTCTCTCAATGGAGAAACTTGTAGCTAAGAGATTGCCGGAGATTTCTGATACAGCCTCAAAATTTCTTGTGGGATCTTTGGATTTTATTGGCATAAATCACTACACCTCAGTCTATACTCGTAACGACAGGACTCGGATTCGTAAACTAGTTATGCAAGATGCTGCTACTGATGCTGCTGTCATTACAACCGCATACCGAAGAGGATCTGCAATTGGAGAAAAGGCAGCTTCAAGTTGGCTGCACATTGTTCCATGGGGCATCCGAAAGTTGGTAAAACATGTGAAAGACAAATATGGGGACACGCCAGTAATTATAACGGAGAATGGAATGGATGACCCAAGTGGACCCTTTAGGACCTTAGAAAAGGCCTTGAATGATGACAAGAGGATAAGATACCATAGAGACTATCTCTCAAACCTATCTGCTGCTATAAGGGAAGATGGTTGCAATGTACGTGGTTACTTTGTATGGTCATTGCTTGACAATTGGGAGTGGAACATGGGATACACCGTACGGTTTGGACTCTACTATGTGGATTTCAGGAACAATCTTACTAGGATACCAAAAGATTCGGTGCAATGGTTCAAAAACATGCTCAGAATAGAGACAGAACATAGTGAAATTTGA 1524 0.4029 MRITIISITLFLVMTKLLVGAESISRADFPEGFVFGTASSAHQFEGATDEGNKGDSIWDTFSRIPGRIVDFSNADKAVDQYHRFQNDINLMKDLGMDSYRFSISWPRIFPNGTGEPNKEGIKYYNSLIDSLLEKGIQPFVTLYHWDLPQMLEDKYEGWLSSQIIKDYEHYANTCFKAFGDRVKHWITFNEPHNFALHGYDLGIQAPGRCSLLGHLLCKKGKSSTEPYIVAHNILLSHAAAYRSYQLHFKEQQGGQIGIALDVIWYEPITELDEDKDAAARAMDFSLGWFLDPLFFGKYPLSMEKLVAKRLPEISDTASKFLVGSLDFIGINHYTSVYTRNDRTRIRKLVMQDAATDAAVITTAYRRGSAIGEKAASSWLHIVPWGIRKLVKHVKDKYGDTPVIITENGMDDPSGPFRTLEKALNDDKRIRYHRDYLSNLSAAIREDGCNVRGYFVWSLLDNWEWNMGYTVRFGLYYVDFRNNLTRIPKDSVQWFKNMLRIETEHSEI* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2197 507 Gene3D Glycosidases 16 500 - -
Gso6g2197 507 PANTHER BETA-GLUCOSIDASE 41-RELATED 13 499 - -
Gso6g2197 507 SUPERFAMILY (Trans)glycosidases 23 498 IPR017853 -
Gso6g2197 507 PRINTS Glycosyl hydrolase family 1 signature 324 338 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 PRINTS Glycosyl hydrolase family 1 signature 402 410 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 PRINTS Glycosyl hydrolase family 1 signature 425 436 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 PRINTS Glycosyl hydrolase family 1 signature 447 464 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 PRINTS Glycosyl hydrolase family 1 signature 471 483 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 PANTHER GLYCOSYL HYDROLASE 13 499 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 Pfam Glycosyl hydrolase family 1 27 499 IPR001360 GO:0004553|GO:0005975
Gso6g2197 507 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 33 47 IPR033132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2197 Gso-Chr6 42087209 42092873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2197 19 444 Glycoside Hydrolase AT5G54570 72.600 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2197 K01188 - gmx:100783543 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2197 6 42087209 42092873 Gso6g2197 6 42087209 42092873 ECH