Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2177 ATGCCTGAGGCACCGAGAGACTACAACCTTTTGGAGCAAAACAAGAAAACCCTCGAGTTCATTGAGGATGTCACTGCCAACGCAGACCAAGTTCAGAAGAGGGTCCTCTCCGAAATCCTCTCCAACAATGCAAACGTTGAGTACCTCAAGAGACACGGCCTCCATGGCCAAACCGACCGCGAAACCTTCAAGAAACTCTTGCCTGTCATAACCTACGAGGACATCCAACCCGACATCAACCGCATCGCCAATGGCGATACTTCTCCAATCCTTTGCTCCAAACCCATTTCAGAATTCCTCACTAGTTCTGGGACATCAGGAGGTGAGAGGAAGCTGATGCCAACAATTGAAGAAGAGCTAGGTAGAAGGAGTTTGCTGTATAGCCTTCTGATGCCAGTGATGAGCCAGTTTGTTCCTGGTTTAGAAAAGGGCAAAGGAATGTACCTAATGTTCATTAAATCCGAGGCCAAAACCCCCGGTGGAATTGTGGCTCGTCCAGTTCTCACCAGCTACTACAAAAGCTCATACTTCAAAGACAGACCCTACGACCCTTACACCAACTACACCAGCCCCAACGAGACCGTCCTCTGCCCGGACTCCTACCAGAGCATGTACTCCCAACTCCTCTGCGGCCTTTGCCAGCACAAGGAGGTCCTCCGTGTCGGCGCCGTCTTCGCCTCCGGCTTCATAAGGGCCATCCGCTTCCTCGAGAAGCACTGGCCCTTACTTTGTCATGATATCCGAACGGGTACCATTGACAATACGGTCACGGACCTGTCGGTCCGTGACGCTGTGATGAAGATCCTCAAGCCTGACGCCAGGCTTGCGGATCTCATCCAGAGTGAGTGTGGGAAGAGCTCCTGGCAGGGAATCATCACCAGGCTGTGGCCCAACACTAAGTATGTGGATGTGATTGTGACTGGGACAATGTCACAGTACATCCCCACGTTGGACTACTACAGCAATGGACTCCCACTTGTGTGCACCATGTATGCGTCTAGTGAGTGCTACTTTGGTGTCAATCTTAACCCTCTTTGCAAACCTAGTGAGGTCTCTTACACCCTCATTCCCACCATGTGCTACTTCGAGTTCTTGCCTGTTAATAGAAGCAATGGGGTGTCCCATGACAATCTCCACACCCCTAGATCCCTCAATGAGAAGGAACAGAAGGAGCTCGTTGAGCTTGTTGATGTCAAACTTGGCCAAGAATATGAACTTGTGGTCACAACTTATGCTGGTTTGTATCGTTACAGAGTTGGTGATGTGCTGAGGGTGGCTGGATTCAAGAACAAGGCACCCCAATTCAACTTTGTGTGCAGAAAGAACGTGGTGTTGAGCATAGACTCAGACAAGACCGATGAGGTTGAGCTCCAGAACGCAATGAAGAATGCCGTGACACACTTGGTGCCCTTTGATGCATCAGTGTCCGAGTACACCAGCTATGCAGACACCACAACAATCCCTGGCCACTATGTCTTGTACTGGGAACTCTCCCTGAAAGGCTCAACCCCAATTCCACCATGTGTTTTTGAGGATTGTTGCTTAACCATAGAGGAATCACTGAACAGTGTGTATCGCCAAGGTCGAGTTTCGGACAAATCGATCGGGCCACTTGAGATCAAGATTGTGGAACAGGGGACTTTTGATAAGCTCATGGACTATGCCATAAGCTTAGGTGCTTCAATAAATCAGTACAAGACTCCAAGGTGTGTGAAGTTTGCACCTGTGCTGGAGCTCTTGAACTCAAGGGTGGTGGAGAAGTATTTTAGTCCAAAATGTCCAAAATGGGTTCCGGGACACAAGCAGTGGATCAACCAGAATTCATCATGA 1830 0.4951 MPEAPRDYNLLEQNKKTLEFIEDVTANADQVQKRVLSEILSNNANVEYLKRHGLHGQTDRETFKKLLPVITYEDIQPDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELGRRSLLYSLLMPVMSQFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQHKEVLRVGAVFASGFIRAIRFLEKHWPLLCHDIRTGTIDNTVTDLSVRDAVMKILKPDARLADLIQSECGKSSWQGIITRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCKPSEVSYTLIPTMCYFEFLPVNRSNGVSHDNLHTPRSLNEKEQKELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMKNAVTHLVPFDASVSEYTSYADTTTIPGHYVLYWELSLKGSTPIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVLELLNSRVVEKYFSPKCPKWVPGHKQWINQNSS* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2177 609 Pfam GH3 auxin-responsive promoter 21 572 IPR004993 -
Gso6g2177 609 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 604 IPR004993 -
Gso6g2177 609 PANTHER BNAC03G14570D PROTEIN 7 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2177 Gso-Chr6 41724607 41727811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2177 9 590 EF-hand Containing Proteins AT1G23160 49.577 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2177 K14487 - gmx:100791987 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2177 6 41724607 41727811 Gso6g2177 6 41724607 41727811 ECH