Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2115 ATGAGTCGAGGAAGTGGAGGTGGATACGATCGTCACATCACTATTTTCTCCCCTGAAGGACGTCTCTTTCAAGTGGAGTATGCTTTCAAGGCTGTGAAGGCTGCAGGAATCACCTCGATTGGTGTCCGAGGAAAGGATTCAATTTGTGTCGTTACTCAGAAGAAGGTTCCGGATAAGCTTTTGGACAACACAAGTGTTACACACCTCTTTCCAATCACCAAGTACCTTGGATTATTGGCTACTGGCATGACAGCTGATGCTAGGACACTGGTCCAACAAGCAAGAAATGAAGCAGCTGAGTTTCGCTTTACATATGGATATGAGATGCCTGTAGATGTATTAGCTAAATGGATTGCAGATAAATCACAAGTCTATACTCAACATGCTTATATGAGACCACTCGGAGTAGTTGCTATGGTTTTGGGTATTGATGATGAATATGGACCTCAGCTATACAAATGTGATCCAGCTGGTCATTACTTTGGTCACAAGGCAACAAGTGCTGGATTGAAGGACCAAGAGGCAATTAATTTCTTGGAAAAGAAGATGAAGAATGACCCTTCATTTACATATGAGGAGACGGTTCAGACTGCCATTTCTGCCCTGCAATCAGTTCTTCAGGAGGATTTTAAGGCCACTGAGATTGAGGTTGGAGTGGTGCGGAAGGATAATCCAGAATTCAGAGTTTTAACCACCGACGAAATTGATGAGCACTTGACTGCAATAAGTGAGCGTGACTGA 741 0.4345 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTQKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLTAISERD* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2115 246 Pfam Proteasome subunit A N-terminal signature 9 31 IPR000426 GO:0006511|GO:0019773
Gso6g2115 246 ProSitePatterns Proteasome alpha-type subunits signature. 9 31 IPR000426 GO:0006511|GO:0019773
Gso6g2115 246 ProSiteProfiles Proteasome alpha-type subunit profile. 24 239 IPR023332 -
Gso6g2115 246 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 8 245 IPR029055 -
Gso6g2115 246 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 246 IPR029055 -
Gso6g2115 246 SMART Proteasome_A_N_2 9 31 IPR000426 GO:0006511|GO:0019773
Gso6g2115 246 Pfam Proteasome subunit 36 220 IPR001353 GO:0005839|GO:0051603
Gso6g2115 246 CDD proteasome_alpha_type_6 8 220 IPR034642 GO:0019773
Gso6g2115 246 PANTHER PROTEASOME SUBUNIT ALPHA TYPE-6 1 243 - -
Gso6g2115 246 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2115 Gso-Chr6 40042426 40047512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2115 K02730 - gmx:732640 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2115 6 40042426 40047512 Gso6g2115 6 40042426 40047512 ECH