Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2076 ATGGCGTTCCCTCTCTCTCCCTCCTTCAACCCCTCCATCGCTCGAAACCGAATCGCGTGCTTCTCGAAGAAGCAGCACCGCCACGTCATCACAAAGGACACGGAAGTGGTGGTGGTAGACAGAGACACGGAGCGTGCCACGTCAGCGGGCGCTATGCTGAAGAGGATAATGAAGCGGTTGAGGAGTGTGGCGGTGGTTCCGATCGTGATTGCGTCGGTTCAGATAAGCGCGTTGGTGGCGCCGTTAGTTGATTACGTGGCGTCTCCGGGTGCCGCCGAAGCGGTTCTGTATTCGCCGGATACGAAGGTTCCGAGGACGGGAGAAGTTGCTCTCCGGAAAGCCATTCCTGCCAATGCTAACATGAAGGCTATTCAGGACACTCTTGAAGATATTTCGTACCTGTTGAGGATTCCGCAGAGAAAACCGTATGGAACAATGGAGGGGAATGTGAAGAAAGCTTTGAAGATAGCAGTAGATGAAAAGAATTCTATATTGGCTAGTATACCAGCAGAACTGAAGGAAAGGGCCTCTTTGGTACATGCATCTCTAATAGAGGGAAAGGGGGGCTTGCAAACTCTACTTCAATCTATAAAGGAACAGGATGCAGATAAAGTATCTGTGAACCTTGCATCTACACTGGATACGGTAGCAGAGCTGGAGTTGTTACAGGCACCAGGATTATCATTTTTGTTGCCAGAGCAATATGCACAACAATATCCACGGCTTTCAGGGAGAGGAACTGTTGCATTCACCATTGAGAAAGGAGATGGTTCAACATTTTCTCCAGTTGGGGGAGAGCAGAAAAATACTGCCACCATTCAGGTTGTTATTGATGGATACTCAGCTCCACTAACTGCAGGGAATTTTGCAAAACTGGTGATGGATGGAGCCTATAATGGCACAAAGCTCAACTGTATCAACCAAGCTGTTATCTCAGATAATGGAGTTGATAAGAACACTGGTTATAGTGTTCCCTTGGAAATAATGCCCTCTGGACAATTTGAGCCCCTTTACAAAACAACATTAAGTGTGCAGGATGGAGAACTGCCGGTTCTTCCGCTATCTGTTTATGGGGCACTTGCTATGGCTCACAGTGAAGCCTCGGATGAGTATTCATCGCCTTATCAGTTTTTCTTCTATCTCTATGATAAACGAAGTGCTGGTTTGGGAGGAATATCATTTGATGAAGGACAATTTTCAGTTTTTGGATACACGACTGCCGGGAGAGACATTCTACCCCAAATAAAAACTGGTGATGTTATTCGTTCTGCAAAGCTTATTGAAGGCCAAGACCGTCTTGTATTGCCGAAGGAAAGTTGA 1320 0.4682 MAFPLSPSFNPSIARNRIACFSKKQHRHVITKDTEVVVVDRDTERATSAGAMLKRIMKRLRSVAVVPIVIASVQISALVAPLVDYVASPGAAEAVLYSPDTKVPRTGEVALRKAIPANANMKAIQDTLEDISYLLRIPQRKPYGTMEGNVKKALKIAVDEKNSILASIPAELKERASLVHASLIEGKGGLQTLLQSIKEQDADKVSVNLASTLDTVAELELLQAPGLSFLLPEQYAQQYPRLSGRGTVAFTIEKGDGSTFSPVGGEQKNTATIQVVIDGYSAPLTAGNFAKLVMDGAYNGTKLNCINQAVISDNGVDKNTGYSVPLEIMPSGQFEPLYKTTLSVQDGELPVLPLSVYGALAMAHSEASDEYSSPYQFFFYLYDKRSAGLGGISFDEGQFSVFGYTTAGRDILPQIKTGDVIRSAKLIEGQDRLVLPKES* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2076 439 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 21 438 IPR044259 -
Gso6g2076 439 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 271 422 IPR002130 GO:0000413|GO:0003755
Gso6g2076 439 Gene3D - 117 222 IPR023222 -
Gso6g2076 439 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 260 439 IPR002130 GO:0000413|GO:0003755
Gso6g2076 439 SUPERFAMILY Cyclophilin-like 272 423 IPR029000 -
Gso6g2076 439 Gene3D - 265 431 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2076 Gso-Chr6 38637385 38643467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2076 - - gmx:100806701 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2076 6 38637385 38643467 Gso6g2076 6 38637385 38643467 ECH