Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2073 ATGGAAAACATGGAGTCTCAAACTTCTTACAAAGCAACAGTGCAGGAGGAAGAATCTGACATCTTTCTCACGAGAAATTCTCCAGTAACTCTCAAGTTCCATGATGTTATCTATAAAATTAAGACCACAAAGTGGGGATTTCTTAAGAACACCAAGGCAGAAGAGAAAGTAATATTGAATGGAGTGACAGGCATGGCTCAATCTGGTGAAATTCTTGCCATGTTAGGTCCCTCAGGAAGTGGCAAAACAACTTTGCTAGCAGCACTGGGAGGCCGGCTCGGAGGGAAACTCCATGGAAGCATAACATACAACGGCAAAGCCTTCTCAAATGTAATGAAGAGGAACACAGGCTTTGTCACACAAGATGATATCCTCTATCCCCACTTGACTGTGGTCGAAACTGTAGTTTTCACTGCTCTTCTGAGATTGCCAAAGAGTTTCACCACAAAGGAGAAAATTGTGCATGCAAAATCTGTGATGGCTCAACTTGGTTTAACCAAGTGCAAGGATAGCATCATTGGTGGACCACTTCTGAGAGGGATTTCTGGAGGGGAGAGAAAAAGGGTTAGCATTGGACAAGAAATGCTCATAAATCCAAGCTTGTTGTTTCTTGATGAGCCAACCTCTGGCTTAGACTCAACAATAGCTAAGAGAATTGTCTCAACTTTGTGGGAGCTTGCAAATGGAGGGAGAACTGTTGTCATGACCATACACCAACCTTCAAGTAGGATGTACTGCATGTTTCACAAGGTGTTGCTGCTTTCAGAAGGGAACCTTTTGTATTTTGGAAAAGGGTCTAAAGCTATGGAATATTTTTCTAGCATTGGATATGCACCAATGACTATGGCCATGAACCCCTCAGACTTCCTTTTGGATCTTTCAAATGGTGTCTACACTGATCAATCGAATGAGGACCATGCCTTAAATAAGCGCAAGTTGATTTCTGCATATAGGAACTACTTCGATGCAAAACTGCAGCCAGTGCTTCATGAAATAACTGAATATGATAAATGTAAGGGTAGAATTGAAGACAATGGCTTTGGGGAATGGCCTACCAGTTGGCCACAGCAATTCCTTGTGCTGCTAAAAAGAGATGTCAAAGAGAGAAAGTACGCATCATTCTCTGGCATGCGGATCTGTCAGGTCCTTATGGTTGCTCTTATTGCAGGACTACTATGGTATAAGTCTGACATTTCACACTTGCAGGATCAGATTGGGATTCTATTCTTCATTTCTAGCTTCTGGAGCAGCATGGCTCTCTTCCAAGCAATATTCACCTTCCCCCAAGAGCTAACAATTCTTAAGAAGGAACGATCCTCTGGAATGTACAGGCTCTCCTCATATTTCATGTCAAGAATGGTTGGTGACCTTCCAATGGAGCTTGGGCTTCCTACCATATTTCTTGCCATAGTCTATTGGATGGCTGGGCTGAAACCTAATGTGGCAAACTTCATATACACAATGCTCAGTGTCTTTCTCAATGTGCTAGTTTCACAAGGGCTAGGCCTTGCCATTAGTGCTATTGTAATGGAACAGAAATCTGCATCCACACTGGCCTCGGTGATCATGCCAACCTCCATTCTGCTTGGTGGATACTATAATCAACATGTGCCAAAATTTATAGCATGGCTGAAATACTTCTCCACCCACTACTACGTGTACCATCTTGTGATAGGGTCTCAGTATGGCACTAGTGACACATACCCTTGTTCTAATGGCCAGTGTTTGGTTGCAGAACATCCTGTGATTAAGCAAGTGGGGCTACATTTGCAAGGGAAAATCACGGCTGCATTGGCTCTGTTCATAATGCTAATAGGCTTCAGACTTGTGGCTTATCTTGCTCTGATGAGGATTGGGGTGACAAAGAAGGCTTAG 1875 0.4315 MENMESQTSYKATVQEEESDIFLTRNSPVTLKFHDVIYKIKTTKWGFLKNTKAEEKVILNGVTGMAQSGEILAMLGPSGSGKTTLLAALGGRLGGKLHGSITYNGKAFSNVMKRNTGFVTQDDILYPHLTVVETVVFTALLRLPKSFTTKEKIVHAKSVMAQLGLTKCKDSIIGGPLLRGISGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTIAKRIVSTLWELANGGRTVVMTIHQPSSRMYCMFHKVLLLSEGNLLYFGKGSKAMEYFSSIGYAPMTMAMNPSDFLLDLSNGVYTDQSNEDHALNKRKLISAYRNYFDAKLQPVLHEITEYDKCKGRIEDNGFGEWPTSWPQQFLVLLKRDVKERKYASFSGMRICQVLMVALIAGLLWYKSDISHLQDQIGILFFISSFWSSMALFQAIFTFPQELTILKKERSSGMYRLSSYFMSRMVGDLPMELGLPTIFLAIVYWMAGLKPNVANFIYTMLSVFLNVLVSQGLGLAISAIVMEQKSASTLASVIMPTSILLGGYYNQHVPKFIAWLKYFSTHYYVYHLVIGSQYGTSDTYPCSNGQCLVAEHPVIKQVGLHLQGKITAALALFIMLIGFRLVAYLALMRIGVTKKA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2073 624 Pfam ABC-2 type transporter 356 561 IPR013525 GO:0016020|GO:0140359
Gso6g2073 624 SMART AAA_5 68 258 IPR003593 -
Gso6g2073 624 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Gso6g2073 624 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 31 281 IPR003439 GO:0005524
Gso6g2073 624 Pfam ABC transporter 59 209 IPR003439 GO:0005524
Gso6g2073 624 Gene3D - 48 275 IPR027417 -
Gso6g2073 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 11 619 - -
Gso6g2073 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 274 IPR027417 -
Gso6g2073 624 Pfam ABC-2 type transporter 238 308 IPR043926 GO:0140359
Gso6g2073 624 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 11 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2073 Gso-Chr6 38511424 38514905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2073 58 280 Calmodulin-binding Proteins AT2G36910 23.605 1.13e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2073 K05681 - gmx:100812397 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2073 6 38511424 38514905 Gso6g2073 6 38511424 38514905 ECH