Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2065 ATGACCCAAGAAACCGTGGACCACGACCACCAACAAGACGACGACACCGAGTCTTGCTTTTTCCACGACTCCAACGACCGTTTACTCTCCTCTTCTTCCTCCTGCTCCACTTCCACCTCCGACGACGACACTCCCACTACCCAAAACGACACCCTCACTCACCGAAACGACGCCTCCATCAATGCCCTCCCACAATTCCCTTTTCCAACTATGTGCAAGTACGACGCTTGGATCTCCGAACCCTCCTCCCTCTCCGAACGCCGCTCCCGCCTCCTCCGCCAGTTCGGCCTCCCCGCGCCGCCGCCTTCCTCCGCCGCAATCCCCCGATCAGCCTCCTCTCACCATTGCACCGACACTTCCTCCACCGCCGCCTCGATTCCCCGATCGAAATCCGACAACACCTCGGATCGCGGCACCAAGCATTGCAAGTCTTCTGTTGTTCCAATCCACGACAATGACGACGGTTTTCTCGTAAATAATAGTAATAATCGTGGTGGTGGTGGTTCTGTTTGTGTGAATAATAATAGGATTTGTGTGAGTGTGTATGAGGATGATGACGACGGTGGTGGTGGAATTGGGGAGGGTAATGTTAATGTCAGTAATGTGGTGGATGAAACTGTGCAAGCGTGTACGATTAGGGATTTGGATAATGGAAAGGAGTTTGTGGTGAAGGAGGATGGGGTGTGGAATGAGGTGAAGGAGGTGGGGACTGGGAGGCGTTTGACTGTGGAGGAGTTCGAGATGACAGTGGGGCATTCGCCAATTGTTCAGGAGCTCATGAGAAGGCAGAATGTGGAGGAAGGTGGTAATGGGGAGGGTGTGGATGGTGATCGGGATGGGGATGGTGGTGTTGGTGGTGATGATGATGAGGGGGATGGTGGCAAGGTGAAGAGGAAAGGAGGGTGGTTTAAGTTTATGAGTTTGAAGAGTGTTGTGGTGGGTCAGAAGGAGAGGCGGAGTGGGGACGAGAAGGATACGTCTTTGTCGGAGAAGGGGGGTGGCCAGAGGTCGAGTTCGGCCACGGATGATAGCCAGGATGGTGGTGGTTTGGTTCATGGGGGTGAGAGAGTGAGGGTTAGGCAGTATGGGAAGTCATTTAAGGAGGTTACGGGCCTTTATAGGAGCCCGGAGATTCAGGCTCATGAGGGTTCCATTTGGTGCATTAAGTTTAGTTTGGATGGGAGGTATCTTGCTAGTGCGGGTGAGGATTGCGTGATCCATGTTTGGCAGGTTGTGGAGTCAGAGAGGAAGGGCGAGTTGCTGGTGGAGAAACCAGAAGATGGGAATTTGAACATCATGTTTCTTGTGAATGGGTCGCCAGAGCCTTCTTCTCCTGGCATGGACAATAATTCGGAGAAGAAGAGAAGGGGGAGGTTGTCTGTTAGCAGAAAATCATTGAGCTTGGACCAGTTAGTGGTGCCAGAAACTGTGTTTGCACTCACTGAAAAACCTGTTTGCTCCTTTAAGGGTCATCTCCATGATGTGCTTGACCTTTCTTGGTCCAAGTCTCAGCGCTTGCTCTCATCTTCAATGGACAAAACAGTGCGACTGTGGCATTTGTCTAGCAAGTCTTGTCTGAAAGTTTTTTCCCACAGTGACTATGTAACTTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCTTTGGATGCTAAGGTTCGTATATGGAGCATTCCTGATCGACAAGTTGTAGATTGGGCTGATTTACATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGCCAGGGTGCGCTAGTTGGTACATACAAGGGTCGCTGCCATTTATATAATACATCTGAAAATAAGTTGCAACAGAAAAGTCAGATAAATTTGCAGAACAGGAAAAAGAGATCTAACCACAAGAAAATTACTGGCTTCCAGTTTGTGCCTGGAAGTTCATCAGAAGTACTTATCACTTCTTCTGATTCTCGGATTCGACTTGTTGATGGTATTGAATTAGTTCATAAGTTTAAAGGGTTTCGGAATGCAAATAGCCAAATTTCTGCCTGCCTCACAGCAAATGGTAAATATGTTGTCTCAGCAAGTGAGGATTCTCATGTATACATCTGGAAAAATGAAGCTGATTGCAGACCTAGCAGGAGTAAAGGTGTCACTGTGACAAGCACATATGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCTTGGTCAGGTATGGATGATACATGGGAGATGCATGATTCATATTTTGCAGAAGAACCTGAGCTTGATGATGATGGGGATGAGGATGAGGTCTCATCGGCCAATCATCCTCCTACTCCTGTAGAGGAAAATCTAGGTTCTGAGGGTTCACAATTTGCTTCAGGTTGCAACAACAGTCCACTTCATGGAACCATTGCAAGTGCAACGGATAGTTATTTTCTTGATAGAATTTCTGCCACATGGCCTGAGGAAAAACTTCTAACAACAAGGGACCGAAGCCCTCGGGTAAGTGTGGATTTATCTAATGGGGTGAATCAAAACATGTCAGCCTGGGGTATGGTGATTGTAACTGCCAGCCTTCAAGGGGAAATTAAGATTTTCCAAAATTTTGGATTGCCACTTGGTATATAA 2592 0.4776 MTQETVDHDHQQDDDTESCFFHDSNDRLLSSSSSCSTSTSDDDTPTTQNDTLTHRNDASINALPQFPFPTMCKYDAWISEPSSLSERRSRLLRQFGLPAPPPSSAAIPRSASSHHCTDTSSTAASIPRSKSDNTSDRGTKHCKSSVVPIHDNDDGFLVNNSNNRGGGGSVCVNNNRICVSVYEDDDDGGGGIGEGNVNVSNVVDETVQACTIRDLDNGKEFVVKEDGVWNEVKEVGTGRRLTVEEFEMTVGHSPIVQELMRRQNVEEGGNGEGVDGDRDGDGGVGGDDDEGDGGKVKRKGGWFKFMSLKSVVVGQKERRSGDEKDTSLSEKGGGQRSSSATDDSQDGGGLVHGGERVRVRQYGKSFKEVTGLYRSPEIQAHEGSIWCIKFSLDGRYLASAGEDCVIHVWQVVESERKGELLVEKPEDGNLNIMFLVNGSPEPSSPGMDNNSEKKRRGRLSVSRKSLSLDQLVVPETVFALTEKPVCSFKGHLHDVLDLSWSKSQRLLSSSMDKTVRLWHLSSKSCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPDRQVVDWADLHEMVTAACYTPDGQGALVGTYKGRCHLYNTSENKLQQKSQINLQNRKKRSNHKKITGFQFVPGSSSEVLITSSDSRIRLVDGIELVHKFKGFRNANSQISACLTANGKYVVSASEDSHVYIWKNEADCRPSRSKGVTVTSTYEHFHCKDVSVAIPWSGMDDTWEMHDSYFAEEPELDDDGDEDEVSSANHPPTPVEENLGSEGSQFASGCNNSPLHGTIASATDSYFLDRISATWPEEKLLTTRDRSPRVSVDLSNGVNQNMSAWGMVIVTASLQGEIKIFQNFGLPLGI* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2065 863 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 159 413 IPR011041 -
Gso6g2065 863 SUPERFAMILY WD40 repeat-like 374 699 IPR036322 GO:0005515
Gso6g2065 863 MobiDBLite consensus disorder prediction 746 778 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 23 58 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 95 145 - -
Gso6g2065 863 Gene3D - 372 723 IPR015943 GO:0005515
Gso6g2065 863 ProSiteProfiles Trp-Asp (WD) repeats profile. 528 562 IPR001680 GO:0005515
Gso6g2065 863 PRINTS G protein beta WD-40 repeat signature 397 411 IPR020472 -
Gso6g2065 863 PRINTS G protein beta WD-40 repeat signature 506 520 IPR020472 -
Gso6g2065 863 PRINTS G protein beta WD-40 repeat signature 548 562 IPR020472 -
Gso6g2065 863 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 528 562 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 764 778 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 437 461 - -
Gso6g2065 863 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 378 411 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 1 22 - -
Gso6g2065 863 ProSiteProfiles Trp-Asp (WD) repeats profile. 378 419 IPR001680 GO:0005515
Gso6g2065 863 Pfam WD domain, G-beta repeat 379 409 IPR001680 GO:0005515
Gso6g2065 863 Pfam WD domain, G-beta repeat 658 696 IPR001680 GO:0005515
Gso6g2065 863 Pfam WD domain, G-beta repeat 483 518 IPR001680 GO:0005515
Gso6g2065 863 Pfam WD domain, G-beta repeat 524 561 IPR001680 GO:0005515
Gso6g2065 863 ProSiteProfiles Trp-Asp (WD) repeats profile. 488 528 IPR001680 GO:0005515
Gso6g2065 863 PANTHER WD REPEAT DOMAIN 44 178 862 IPR040324 -
Gso6g2065 863 PANTHER WD REPEAT DOMAIN 44 10 134 IPR040324 -
Gso6g2065 863 MobiDBLite consensus disorder prediction 314 355 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 315 330 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 266 297 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 331 345 - -
Gso6g2065 863 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 10 134 - -
Gso6g2065 863 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 178 862 - -
Gso6g2065 863 SMART WD40_4 615 654 IPR001680 GO:0005515
Gso6g2065 863 SMART WD40_4 481 519 IPR001680 GO:0005515
Gso6g2065 863 SMART WD40_4 655 696 IPR001680 GO:0005515
Gso6g2065 863 SMART WD40_4 371 410 IPR001680 GO:0005515
Gso6g2065 863 SMART WD40_4 522 561 IPR001680 GO:0005515
Gso6g2065 863 SMART WD40_4 564 602 IPR001680 GO:0005515
Gso6g2065 863 MobiDBLite consensus disorder prediction 106 132 - -
Gso6g2065 863 MobiDBLite consensus disorder prediction 1 58 - -
Gso6g2065 863 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 488 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2065 Gso-Chr6 38224092 38231469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g2065 485 696 Miscellaneous Gene Families AT5G08390 22.523 1.65e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2065 K20241 - gmx:100806518 1563.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2065 6 38224092 38231469 Gso6g2065 6 38224092 38231469 ECH