Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2060 ATGAGGGGTCCTTTGGGTGCAGTAATAGGAAGGTACCCATCAAGTGATGGAGTTACCCAAATGGGTGGAATCATAAGGCACAACAGGAAATGCAGGGACATCATTGTTCTTGTGATCTTCATAGCTTTTTGGATAGCAATGATTGTCAACTCCAGCTTTGGTTTCAACCAAGGAAACCCACTGAGGCTTACTTATGGACTTGACTACAAAGGGAATGTGTGTGGGGACAAGCATGCACACCCTGGCCTTAGTGAATTAGAGCTCAGATATTGGCAAAATCCTAATCAGGTTTATCAGAGTGGATTGAAGGATAGCCAATTCAAACTGGCTGATGCCCGCAGTATATGCTTGTCGGAGTGCCCTATGCCTTCAGAAGATTCCCTTAATTGGGTGTGTGATTATCCTGAAGGAGATATTCGTCTTTCGATGAAAGATTGGATTAATAGGAACTATGATTATTTTGAGTTCCTTACACCAGAAATGAGAAACTCGTCTCTTCAACTACAGGGTCCTTGTTATCCTGTCATATTTCCCACTGTAAATGTTTATTGGAATTGCCAATTTATTGCTCGGGCGTCAAATACATCTTTGAAGCATTGGCAGCAGATGGGTGGAGTTAACATCAACGAAGACATTGTTATTGACAAGTCAATTCACAAGTCTATTAATTCTCGGTCAGCTGTCTTAGAGAGATACATGGCAGACATAGGAAAGGCATGGCCTGTGCTGATTGTCTGCGGAGGGATTTTGCCTCTTTTTCTGTCTGTGATTTGGCTGATGATGATTCGACATTTTGTTGCTGCTATGCCTTGGATAACAGTTGTTCTCTTTAATGTTCTAATAATATCTGTCACAATGTTCTACTACCTAAAAGCTGGATGGATTGGAAATGATGCGATTTCTCCCATCATTGGTGAGCATGACCCATACATTAGTGTATATGGGAGGGAGCTGACTCATATACGAGTTGTCACTATACTTATGACCTTTATCATGGTTGTTGCCATTCTTACATCAATTGCCATTGTTCGCCGCATCCTTATGGCAACATCTGTCCTGAAAGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCCCTCATTATTTTCCCTCTCATACCATATACTGTCCTTGCAGTCTTTTACATGTTCTGGATTTCAGCTGCTCTCCATTTGTTCAGCTCTGGCCAGGTTGTTCAGAATAATTGCAACTCTAACTGCTGCACATATGATCTTATTGCAAAACGGGTAAACTGTGATCGTTGTTGTGGTTATAGCATTCATTACACACCACATATTGGAGTTGCCATCCTTTTCCACCTATTTGGGTGTTATTGGGCTACACAATTTTTCATAGCTTGCTCCTCAACAGTGATTGCTGGGTCTGTCGCCTCGTATTACTGGGCACGCGGTGAAACATCTCCAGAAATTCCTTTTCTTTCTGTCTTTTCCTCCATGAAGAGGCTTATGCGTTACAGTCTTGGGTCTGTGGCTCTTGGCTCTCTGATTGTATCATTCGTAGAATCAATCCGCTTTCTGCTTGAAGCTATTCGTCGTAAACTGAAAGTCTCAAGTCATGGGCATGACAGCTGCTTAGGCAAGGCTGCATACCAATTTTCTCAATGTTTTCTCAGGTGTATTGAATGGACCATCAAGTCAGTAAACCGAAATGGTTACATCATGATTGCTATAACTGGCAAAAGTTTCTTTAGCGCTTCTTTTATTGCAACAGAACTGATCATGAATAACATTCTAAAGATTGGCCGGCTTAACGTGATAGGAGATGTCATTTTGTTCCTTGGAAAACTGTGTGTCAGCCTCTCATGTGCTTTGTTTGCGTTCCTCATGTTGGACACACACAAGTACAACTCTGCTCATAACAAGACCTCATCTCCACTCTTACCTGTTGTGGTTTGCTGGGCTCTTGGATACATTGTTGCAACCCTTTTCTTTGCAGTTGTGGAGATGTCAATTGATACCATAGTTCTCTCATTCTGCCAGGATTCTGAAGAGCACCAAGGGACAGCACAGTATGCTCCACCCCTTCTCGTTGAGACACTCAGTGACCAAAATGAGATGCAGAGACTCACACAAGGACCCTAA 2100 0.4238 MRGPLGAVIGRYPSSDGVTQMGGIIRHNRKCRDIIVLVIFIAFWIAMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAHPGLSELELRYWQNPNQVYQSGLKDSQFKLADARSICLSECPMPSEDSLNWVCDYPEGDIRLSMKDWINRNYDYFEFLTPEMRNSSLQLQGPCYPVIFPTVNVYWNCQFIARASNTSLKHWQQMGGVNINEDIVIDKSIHKSINSRSAVLERYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLIISVTMFYYLKAGWIGNDAISPIIGEHDPYISVYGRELTHIRVVTILMTFIMVVAILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYTVLAVFYMFWISAALHLFSSGQVVQNNCNSNCCTYDLIAKRVNCDRCCGYSIHYTPHIGVAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARGETSPEIPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLEAIRRKLKVSSHGHDSCLGKAAYQFSQCFLRCIEWTIKSVNRNGYIMIAITGKSFFSASFIATELIMNNILKIGRLNVIGDVILFLGKLCVSLSCALFAFLMLDTHKYNSAHNKTSSPLLPVVVCWALGYIVATLFFAVVEMSIDTIVLSFCQDSEEHQGTAQYAPPLLVETLSDQNEMQRLTQGP* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2060 699 Pfam Plasma-membrane choline transporter 326 669 IPR007603 GO:0022857|GO:0055085
Gso6g2060 699 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 697 IPR007603 GO:0022857|GO:0055085
Gso6g2060 699 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2060 Gso-Chr6 38171895 38179181 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2060 K15377 - gmx:100803501 1408.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2060 6 38171895 38179181 Gso6g2060 6 38171895 38179181 ECH