Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g2023 ATGGGGGTGACACCACTAGATCACGCGGTGTTCCTCGATCCAGCTCCCTTCGACAATGTGAAGAACAGACTCGTCGGGGCCGACAATGCTTGTCTTGATTTATGTCAAAAGGGTTGTCCTGTAGTTGGAGCTATGGCAGTTGAGGTTGTGGGATTTGAGATGGTTCAAGGGCCAGTGGAGAATGGTGCTAAAGAAGACAAATCTATTTCAGAAAAAACTGAAAATGGGAAATTGGAACAAGACACAGGAGTTGCTGAGCCAACAAAATTTGGGTCACATGGAGATGAATCTGCTAAACCAGAAGCAAATGTTGTTTCAGATGCCAATGTCCCCAAAGATGCAGTTGACGATTGGCCTGCGCCAAGGCAGATACATTCTTTTTATTTTGTTAGGTTCCGGCCTTATGATGATCCCAACATTAAAGCGAAACTTGATAAGTATGATAAAGAGATTAGCCAGGAAAATCAAGCACGAATTCAGGTCACTGATGCTTTAAGGGCAAAAAGGACAGAACGAGCAGGGTGTATTTCTCAGATTAAGTCTCTAAAAGGTGACAATAGGCAATTTCAGAGCATTGTTGATGAAAAAATTAAAGAGATTGAACCTCTGCAGCAGGCACTGGGCAAGCTGCGTACTGCAAATAATGCTGGTCGGGGTGTTGGATTATGCTCATCTGAGGAGGAGCTTAACAATCTTATTAATAGCTTGCACTACCGCATACAACATGAAAGCATTCCATTTGCTGAAGAAAAACAAATCCTTCGAGAAATTAAACAGCTAGAGGGGACAAGGGAGAAGGTTATTGCTAATGCTGCCATGAGAGCCAAAGTACAAGATTCTATGGGGCAGAAAGAAGCCATTCAAGATCAGGTTAAGCTTATAGGTGGTGATTTGGATGGAGTCAAAAAGGAGAGGCAAGCAATCCGGTCCAAAATCAAGCAACTTGAAGATACAGTAAAAGCCTTAGACAAGGATATTCAGTCTTTACAGGATGAACTAGGAGCTGTTACTGAAAAGAGGGAAAAAGCTTATGAGAGCATTCAGCAGCAAAGAAAACAACGCGATCAGGGGAACTCCTATTTCTACCAAAGTCGTACAATTTTGAACAAAGCACGGGAGCTTGCTGCAAAGAAAGATATTAATGCGATTGAGGAACTGGCACAAACTGAGGTTGAGAAAGCTATGTCACTCTGGAACAGTGACAAATCCTTTAGGGATGACTATGAGAAAAGACTTTTGCCATCACTGGACATGCGACAATTATGTAGGGATGGACGGATGAGGAACCCAGATGAAAAGCCACTGCTGGAAGAACCGAAACCTGCCGAAACTGATACATTGCCGAAAAGCAGTGTAAAACAGCCAAAGGAGGAGCCTAAATCATCTCCACCAGAAACTGTGCCTGAGCAGAAGATTCAGAAAGAAACCAAAAAGAAAGGAAAAGATTTGAAATCCAATCTGAACAAGGTTTTAGAAGACACTGATGAATATGAATTTGAATTGCCAAAGGTGAATAAGGAGCCTCCGATTGATCCAGAAAAGCTGAAGGAGATGAAAAGAGAAGAGGAAATCGCGAAAGCGAAGCAGGCTTTGGAAAGGAAGAAAAAACAAGCGGAGAAAGCTGCAGCCAAAGCAGCTACCAGAGCACAAAAGGAAGCTGAGAAGAAGCTCAAGGTACGTGAGAAGAAAGCGAAGAAGGTGGCTGGTGGCACTGGAGCTGTTCCAAGTCCTGAGGAACCAGCAAATGAAGCTGTGGAGGTTGCTGAACAGAAGACCGATGATAGCATGGAAGCCTCAGCTCCGGCGAAGGAGAAGGTCCCAAAGGAGAGCAGTGTTAAGTTCAGGAATCGAGCCAAAGCACTGAAAGGCCCCGACACTATCCCAAAAGCTATTATGAAGAGGAAAAGGTCTAACTACGACGACTGGATATGGATTGCATCTTGTGTTTTTCTTGTCCTGTCTGCGTTGGTGTTTGCATACATTATTCTTTCTTGA 1995 0.4366 MGVTPLDHAVFLDPAPFDNVKNRLVGADNACLDLCQKGCPVVGAMAVEVVGFEMVQGPVENGAKEDKSISEKTENGKLEQDTGVAEPTKFGSHGDESAKPEANVVSDANVPKDAVDDWPAPRQIHSFYFVRFRPYDDPNIKAKLDKYDKEISQENQARIQVTDALRAKRTERAGCISQIKSLKGDNRQFQSIVDEKIKEIEPLQQALGKLRTANNAGRGVGLCSSEEELNNLINSLHYRIQHESIPFAEEKQILREIKQLEGTREKVIANAAMRAKVQDSMGQKEAIQDQVKLIGGDLDGVKKERQAIRSKIKQLEDTVKALDKDIQSLQDELGAVTEKREKAYESIQQQRKQRDQGNSYFYQSRTILNKARELAAKKDINAIEELAQTEVEKAMSLWNSDKSFRDDYEKRLLPSLDMRQLCRDGRMRNPDEKPLLEEPKPAETDTLPKSSVKQPKEEPKSSPPETVPEQKIQKETKKKGKDLKSNLNKVLEDTDEYEFELPKVNKEPPIDPEKLKEMKREEEIAKAKQALERKKKQAEKAAAKAATRAQKEAEKKLKVREKKAKKVAGGTGAVPSPEEPANEAVEVAEQKTDDSMEASAPAKEKVPKESSVKFRNRAKALKGPDTIPKAIMKRKRSNYDDWIWIASCVFLVLSALVFAYIILS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g2023 664 MobiDBLite consensus disorder prediction 528 620 - -
Gso6g2023 664 MobiDBLite consensus disorder prediction 61 101 - -
Gso6g2023 664 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 54 558 - -
Gso6g2023 664 Coils Coil 298 346 - -
Gso6g2023 664 MobiDBLite consensus disorder prediction 64 79 - -
Gso6g2023 664 MobiDBLite consensus disorder prediction 584 620 - -
Gso6g2023 664 PANTHER PROTON PUMP-INTERACTOR 1 54 558 IPR029669 GO:0005783|GO:0005886|GO:0010155
Gso6g2023 664 Coils Coil 517 563 - -
Gso6g2023 664 MobiDBLite consensus disorder prediction 528 567 - -
Gso6g2023 664 MobiDBLite consensus disorder prediction 422 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g2023 Gso-Chr6 36269396 36276149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g2023 - - gmx:100793963 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g2023 6 36269396 36276149 Gso6g2023 6 36269396 36276149 ECH