Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1998 ATGACAGCCTGGAATTTCCTCAAACAGTTAACGTGCACCGTAGGCGTTCATTCTCCCACCCTCTCCCGTCGCCTCATACACTACTCATTACTTGTTCCCTCTCTCTCCGCTCATCACAAAATTGTTAGGTACCAATGGCTTCCCCATTTCCGTGTCAATCTTTATGCGGCAGTTCCAAATGCAAAGTTTTCAACAGCTTCTTCTTCCCAAACTCTATCAGACACGTCTTTGGCTCCACGTGCTCCTTATACTTCCGTTTTGATTCACTGTCCTAAAGACACTGCAGATGTGCTTGCAGAAGCTCTTTTATGCTTTGGTGCAAGTTCTGTTAGCATGGATCAAGATGATGTCTCTCAAAGTACAGATGAGATTTGCATTAGTTCAATATTTCATGAAGTTGAGGATATAAATGTGAGCATTTCACATGCAGCTGATTCTATTGGTTTGAAGGAGATACCAAGATATGAAGTTAAAATTGATGACGAGGAGGACTGGATGAAAAGATCTCAGGAATCACTTCATCCAGTTCAAGTTACTGAAGGGCTATGGGTGGTGCCCAAGTGGTGTACTCCACCGGATGTTCAAGCAACAAATATAATTGTCAATCCTGGACTAGCCTTTGGAACGGGGGAACATGCCACTACCAAACTCTGTCTATTACTCTTACATGGTTGTATAAAAGGAGGGGAGCACATTCTGGACTATGGAACGGGAACTGGAATTCTTGCAATTGCGGCTCTTAAGTTTGGAGCTGCCTTTGCTGTTGGAGTTGATGTAGATTCAGAAGCAATTGCATCAGCATCTCAAAACGCTTACCTGAACAACATTGGACAAGACAAAATGCAACTGCACCTGGTTGCTAGCAAAACCTCTTCATCGTCCAAAAATGACTTGACATTTGGAGTTATGGAGGGAGAAAATACTTGTGAGATACATCCAGTCACTGATGAGGAAAAGTTTGATGTGGTCGTTGCAAATATACTCTTAAATCCTTTATTGGATCTTGCTGATCAAATTATCTCTCATGCAAAGCCCGGAGCAGTTGTTGGTCTCTCCGGTATCTTATCGGAGCAGGTCCAGTACATTATTGAAAGATATTCACCATTCTTAGAAGGCATAGAAGTGTCCAAAATGGATGACTGGGCCTGTGTGAGTGGTAGAAAAAAAAAATTTGAATGTGAGGTGACTCATTAA 1194 0.4229 MTAWNFLKQLTCTVGVHSPTLSRRLIHYSLLVPSLSAHHKIVRYQWLPHFRVNLYAAVPNAKFSTASSSQTLSDTSLAPRAPYTSVLIHCPKDTADVLAEALLCFGASSVSMDQDDVSQSTDEICISSIFHEVEDINVSISHAADSIGLKEIPRYEVKIDDEEDWMKRSQESLHPVQVTEGLWVVPKWCTPPDVQATNIIVNPGLAFGTGEHATTKLCLLLLHGCIKGGEHILDYGTGTGILAIAALKFGAAFAVGVDVDSEAIASASQNAYLNNIGQDKMQLHLVASKTSSSSKNDLTFGVMEGENTCEIHPVTDEEKFDVVVANILLNPLLDLADQIISHAKPGAVVGLSGILSEQVQYIIERYSPFLEGIEVSKMDDWACVSGRKKKFECEVTH* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1998 397 CDD AdoMet_MTases 232 349 - -
Gso6g1998 397 Hamap Ribosomal protein L11 methyltransferase [prmA]. 81 388 IPR004498 GO:0006479|GO:0008276
Gso6g1998 397 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 82 390 - -
Gso6g1998 397 Gene3D Vaccinia Virus protein VP39 173 396 IPR029063 -
Gso6g1998 397 Pfam Ribosomal protein L11 methyltransferase (PrmA) 83 389 - -
Gso6g1998 397 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 153 387 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1998 - - gmx:100797477 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1998 6 35333782 35340156 Gso6g1998 6 35333782 35340156 ECH