Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1988 ATGGCAGCATCAGTTTCATGCTCATGGCTAACTCTTCCGTCCCAAATGAGGAAACTTTCCCTCACATCCTCTTCTTCTTCTCTTTCCATCTCCAATTCTGCTTCTCTCAGTTTCTCCAGAAACCTCTCACACCCTCTCTTCTCACAAGGTAACTGCTTGTCGCTGAGCACAGTGCAGAGGCGCGCGTCTGTGGTCTGCGAGGCTGCGCCGAAAAAGGTGGATTCGGCTGTGAAGAGAGCGCGCCAAGCCGAGAAGCGCCGCGTGTACAACAAAGCTCGGAAATCGGAGATTAAAACACGCACCAAGAAGGTTTTGGAGGCTCTGGAAGTGCTTAAGAAGAAACAAGATGCGCAGGCCGAAGAAATCCTCTCCATTGAGAAGTTGATCGGAGAGGCATACTCGATAATTGACAAAGCTGTGAGAGTAGGCACACTGCACAGGAACACTGGAGCTAATCGCAAGTCTCGGCTTGCTCGAAGAAAGAAGGCAGTGGAGATCCATCATGGCTGGTATACCCCAACTCCTGAAGCCAGTGTCTGA 540 0.5093 MAASVSCSWLTLPSQMRKLSLTSSSSSLSISNSASLSFSRNLSHPLFSQGNCLSLSTVQRRASVVCEAAPKKVDSAVKRARQAEKRRVYNKARKSEIKTRTKKVLEALEVLKKKQDAQAEEILSIEKLIGEAYSIIDKAVRVGTLHRNTGANRKSRLARRKKAVEIHHGWYTPTPEASV* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1988 179 SUPERFAMILY Ribosomal protein S20 74 176 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso6g1988 179 Hamap 30S ribosomal protein S20 [rpsT]. 61 163 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso6g1988 179 Gene3D Ribosomal protein S20 73 179 IPR036510 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso6g1988 179 TIGRFAM S20: ribosomal protein bS20 72 159 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso6g1988 179 Pfam Ribosomal protein S20 74 160 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Gso6g1988 179 PANTHER 30S RIBOSOMAL PROTEIN S20, CHLOROPLASTIC 1 178 - -
Gso6g1988 179 PANTHER 30S RIBOSOMAL PROTEIN S20 1 178 IPR002583 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1988 Gso-Chr6 34968504 34971680 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1988 K02968 - gmx:100786192 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1988 6 34968504 34971680 Gso6g1988 6 34968504 34971680 ECH