Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1984 ATGGAAAAAGTTGGTGTGGCTGTAAATAGCAAAAATCAAGAATCCAAAGCAACTTCCACCATTACCATTAAGGGTTTCATGAGCCTTCTAATGAAAAGTGTAGATGAGAATGGTGATGGTAGCAAGAGAGTTATTTCTCTGGGTATGGGTGACCCAACTCTCACCACTTATTTTCCCATCTCAAATGTAGCTGAAAAAGCTGTTGCTGAAGCACTTCAGTCACACAGGTTTCGTGGCTATGCTCCCACTGCAGGTCTTCCCCAGGCCAGGATTGCAATTGCTGAATACCTGTCTCGTGACCTTCCTTACCAATTATCAAGTGATGATGTTTACATCACTTGTGGATGCACACAAGCCATTGATGTTTCAGTGGCGATGCTTGCTCGCCCCGGTGCAAACATCATTCTTCCAAGACCAGGTTTCCCACTCTATGAACTTAGCGCTTCATTTAGAGGAGTTGAAGTGAGGCATTATGATCTGCTTCCAGAGAAAGGTTGGGAGGTTGATCTAGATGCTGTTGAAGCTCTTGCTGATCAGAACACTGTTGCTTTGGTGATTATAAATCCTGGGAATCCTTGTGGGAATGTGTACAGTTACCATCATTTGGAGAAGATTGCTGAAACTGCAAAACGGGTTGGAACAATTGTGATTGCTGATGAAGTTTATGGCCATCTTGCATTTGCGGGCAAGCCTTTTGTGCCAATGGGAGTTTTTGGCTCTATTGTTCCTGTTCTGACTCTTGGCTCATTTTCTAAGAGATGGATAGTTCCTGGATGGAGGCTTGGTTGGTTTGTGACAAATGATCCATCTGGCACTTTTAGAAATCCAAAGGTAGATGAGCGCTTTAAAAAGTACTTTGATCTTTTGGGAGGTCCAGCCACCTTCATCCAGGCAGCTGTACCTCAGATAATTGAGCATACTGAAAAGGTTTTCTTCAAGAAAACCATTGATAATTTGAGGCATGTTGCAGATATATGTTGTAAAGAGTTGAAGGATATTCCATACATTATTTGCCCTTATAAACCAGAAGGGTCCATGGCTATGATGGTGAAACTAAACCTTTCACTTCTGGAGGATATTAGCGATGATATTGATTTCTGTTTCAAGCTTGCTAAGGAGGAATCTGTTATCATTCTTCCAGGAACTGCGGTAGGGCTGAATAATTGGCTTCGTATTATTTTCGCTACAGATCCAGTTGCTCTTGTAGAGGGTTTGAAGAGGGTAAAATCTTTTTGTGAAAGACATGCAAGAAAGTGGTCAATGACTACAGAATAA 1275 0.4196 MEKVGVAVNSKNQESKATSTITIKGFMSLLMKSVDENGDGSKRVISLGMGDPTLTTYFPISNVAEKAVAEALQSHRFRGYAPTAGLPQARIAIAEYLSRDLPYQLSSDDVYITCGCTQAIDVSVAMLARPGANIILPRPGFPLYELSASFRGVEVRHYDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCGNVYSYHHLEKIAETAKRVGTIVIADEVYGHLAFAGKPFVPMGVFGSIVPVLTLGSFSKRWIVPGWRLGWFVTNDPSGTFRNPKVDERFKKYFDLLGGPATFIQAAVPQIIEHTEKVFFKKTIDNLRHVADICCKELKDIPYIICPYKPEGSMAMMVKLNLSLLEDISDDIDFCFKLAKEESVIILPGTAVGLNNWLRIIFATDPVALVEGLKRVKSFCERHARKWSMTTE* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1984 424 CDD AAT_like 45 409 - -
Gso6g1984 424 Pfam Aminotransferase class I and II 43 399 IPR004839 GO:0009058|GO:0030170
Gso6g1984 424 PANTHER TYROSINE AMINOTRANSFERASE 11 418 - -
Gso6g1984 424 SUPERFAMILY PLP-dependent transferases 39 414 IPR015424 -
Gso6g1984 424 Gene3D Aspartate Aminotransferase, domain 1 46 412 IPR015422 GO:0003824
Gso6g1984 424 TIGRFAM tyr_nico_aTase: tyrosine/nicotianamine family aminotransferase 11 416 IPR005958 GO:0006520|GO:0008483|GO:0030170
Gso6g1984 424 PIRSF Tyr_transaminase 2 424 IPR005958 GO:0006520|GO:0008483|GO:0030170
Gso6g1984 424 Gene3D - 63 308 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1984 Gso-Chr6 34789727 34799330 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1984 K00815 - gmx:100785132 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1984 6 34789727 34799330 Gso6g1984 6 34789727 34799330 ECH