Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1977 ATGGCTCCAACAAGAAACCACCTTCTTCACATTGCCATGTTCCCATGGTTTGCAACAGGTCACATGACTCCATTCCTCCACCTTTCAAACGAGTTAGCCAAAAGGGGTCACAAAATCACGTTCTTGCTACCTAAAAAAGCCAAACTACAACTCCAACACCTCAACAACCATCCTCACCTCATCACATTCCATACCCTCACAATTCCTCATGTAAAAGGCCTTCCTCATGGCACCGAAACAGCCTCAGAGATCCCCATTTCCTTGAACCATTTACTAGTCATAGCCATGGACAAAACCCGTGACCAAGTGGAGCACACACTTAGTGCAACAAACCCTGATTTTGTGCTCTATGATAACGCTTATTGGGTGCCCCAGATAGCAAAAAAGCTGGGCATCAAAACCATTTGTTACAATGTGGTTTGTGCAGCAAGTTTGGCTATAGTTCTTGTGCCTGCAAGGAATGTTCCCAAGGACAGGCCAATTACTGTGGAGGAACTAAGCCAACCACCAGAAGGGTACCCTTCATCCAAAGTAGTTCTTACTGGCCTTGAAGCAGAGTCATTGATGTTTATTTCAGTACCCTTTGGTGAAGACAACATAACATTCTATGATCGCATAACTAGTGCCTTGAGAGAAAGTGATGCTATAGCCATTAGAACAAGTAGGGAAATTGAGGGTAACTTTTGTGACTACATTGCATCACAGTTTGGAAAAAAAGTGCTTTTGACTGGGCCAGTGTTGCCAGAGGAGGCTGAGGGGAAGTTAGAAGAAAATTGGGCCAATTGGCTTGATGCGTTTGCGAATGAGTCTATTGTGTATTGTGCATTTGGGTCTCAAATCAATTTGGAGAAAGATCAATTTCAAGAGCTTTTGCTTGGGTTTGAGCTTTCAGGGTTACCCTTTTTGGTTGCTCTCAAAACTCCTAGAGGGTGTGAGAGTGTGGAAGAGGCACTGCCTGAGGGGTTTGAAGAGAGGGTGAAGGGGAGAGGGGTGGTTTCAAGGGGGTGGGTTCAGCAATTGTTGATCTTGAAGCACCCTTCTGTGGGGTGCTTTGTGAACCATTGTGGGTTTGGGTCTATGTGGGAGTCTTTGATGAGTGACAAGCAGATAGTGTTGGTTCCACAGTTGGGGGACCAAGTTTTGAACACCAAGTTGCTTGTTGAGGAACTTGGAGTGGCTGTTGAGGTGGAGAGAGGGGGAAATGGGTGGGTCTCCAAAGAGAGTTTGAGCAAAGCCATTAAGTTAGTGATGGATGGAGACAGTGAGGTTGGTGCTAGAGTGAAGAAGAATCACATGGAGTGGAAGAAAACTGGGGGCAGTCCTAATTTAATGAATGGTTACATGGATAGGTTTGTCCAAAATCTTCAAGATTTTCCTCTCCATGGGTGA 1389 0.4528 MAPTRNHLLHIAMFPWFATGHMTPFLHLSNELAKRGHKITFLLPKKAKLQLQHLNNHPHLITFHTLTIPHVKGLPHGTETASEIPISLNHLLVIAMDKTRDQVEHTLSATNPDFVLYDNAYWVPQIAKKLGIKTICYNVVCAASLAIVLVPARNVPKDRPITVEELSQPPEGYPSSKVVLTGLEAESLMFISVPFGEDNITFYDRITSALRESDAIAIRTSREIEGNFCDYIASQFGKKVLLTGPVLPEEAEGKLEENWANWLDAFANESIVYCAFGSQINLEKDQFQELLLGFELSGLPFLVALKTPRGCESVEEALPEGFEERVKGRGVVSRGWVQQLLILKHPSVGCFVNHCGFGSMWESLMSDKQIVLVPQLGDQVLNTKLLVEELGVAVEVERGGNGWVSKESLSKAIKLVMDGDSEVGARVKKNHMEWKKTGGSPNLMNGYMDRFVQNLQDFPLHG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1977 462 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 421 IPR002213 GO:0008194
Gso6g1977 462 PANTHER GLYCOSYLTRANSFERASE 8 457 - -
Gso6g1977 462 Gene3D Glycogen Phosphorylase B; 5 261 - -
Gso6g1977 462 Gene3D Glycogen Phosphorylase B; 262 438 - -
Gso6g1977 462 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2'''-O-XYLOSYLTRANSFERASE-RELATED 8 457 - -
Gso6g1977 462 CDD GT1_Gtf-like 9 443 IPR002213 GO:0008194
Gso6g1977 462 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1977 Gso-Chr6 34457314 34458977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1977 9 458 Glycosyltransferase AT4G27570 58.278 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1977 - K17193 gsj:114416818 922.154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1977 6 34457314 34458977 Gso6g1977 6 34457314 34458977 ECH