Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1949 ATGTTAGCAACAAAAGTTAAAACACTAGCAATTTTCAGTTCCTTCAACCACCCCATGTCAATCCAATCTTTGATTGATCATCGCCGGATCCAATCCCTCTTCCCAATTGTGTTGTACTCAATTCTAGTCTTGGGAGCTGCAAGGTTAGTCCTAGATAGTTTGAAGATAAGCCATAATAATAGCTATGTTTTCAGGCTCTATGGCATGCCAAATGGTGGAAGAAACAGTAGATTATTACCTGTTGTGGTTTTGCCAGAGGACCGCATTGAGGAAGATTGCAATGTGTTTGAAGGGACATGGATGTGGGACAATGTGTCCTATCCTCTTTATGAAGAGGAGAGTTGCCCTTATTTGGTTAAGCAAACCACTTGCCACAAGAATGGGAGACCTGATTCTTTCTACAAGAATTGGAGATGGCAGCCTAGCGGATGCAACCTCCCAAGATTTGACGCTTTGAAGTTGTTGCACATGTTGAGGGACAAGAGAATGATGTTTATCGGAGACTCATTACAAAGAGGCCAATTTGAGTCTATGATCTGTTTGATACAATCTGTAATTCCTGAAGGAAAGAAATCCCTCGAGAGAATTCCACCTATGAAGATCTTCAAAATTGAGGAGTTCAATGTATCGATTGAGTACTATTGGGCTCCATTCATTGTGGAATCCATTTCAGATCATGCAACAAACCATACGGTACATAAACGAATGGTGAGGCTTGACTCCATAGCTAACCATGGCAAACATTGGAAAGGAGTGGACATTTTGGTGTTCGAGAGTTATGTTTGGTGGATGCACAAACCTTTGATCAATGCTACATATGAATCGCCACACCGTGTCAAAGAATATAATGTCACCACAGCATATAAGTTGGCTTTGGAAACATGGGCAAATTGGTTAGAATCAAACATCAAACCGCTAACTCAAAAGGTCTTTTTCATGAGTATGTCTCCAACACATCTGTGGAGCTGGGAATGGAAACCTGGAAGTAATGAAAACTGCTTCAATGAGTCATACCCAATCCAAGGTCCATACTGGGGCACTGGCTCAAATCTTGAGATTATGCAGATAATACATGATGCACTACGTTTACTGAAAATAGATGTCACCCTTTTGAACATCACCCAATTATCAGAATACAGAAAAGATGCTCACACATCAGTTTACGGGGAGAGAAAGGGAAAGCTCTTGACAAAAAAACAGAGAGCCAACCCAAAAGATTTTGCAGATTGTATTCACTGGTGCCTACCTGGAGTCCCTGATGCATGGAATGAAATCCTATATGCATATCTGTTAAAGGGTTATCAAAACTTCTCTTGA 1317 0.4085 MLATKVKTLAIFSSFNHPMSIQSLIDHRRIQSLFPIVLYSILVLGAARLVLDSLKISHNNSYVFRLYGMPNGGRNSRLLPVVVLPEDRIEEDCNVFEGTWMWDNVSYPLYEEESCPYLVKQTTCHKNGRPDSFYKNWRWQPSGCNLPRFDALKLLHMLRDKRMMFIGDSLQRGQFESMICLIQSVIPEGKKSLERIPPMKIFKIEEFNVSIEYYWAPFIVESISDHATNHTVHKRMVRLDSIANHGKHWKGVDILVFESYVWWMHKPLINATYESPHRVKEYNVTTAYKLALETWANWLESNIKPLTQKVFFMSMSPTHLWSWEWKPGSNENCFNESYPIQGPYWGTGSNLEIMQIIHDALRLLKIDVTLLNITQLSEYRKDAHTSVYGERKGKLLTKKQRANPKDFADCIHWCLPGVPDAWNEILYAYLLKGYQNFS* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1949 438 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 31 28 432 - -
Gso6g1949 438 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 28 432 IPR029962 GO:0016413
Gso6g1949 438 Pfam PMR5 N terminal Domain 92 145 IPR025846 -
Gso6g1949 438 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 428 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1949 Gso-Chr6 32720219 32724461 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1949 - - gmx:100804200 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1949 6 32720219 32724461 Gso6g1949 6 32720219 32724461 ECH