Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1876 ATGGAAGTGACGAATAAATACATAGTAATAAAGCATCACGTTGAAGATGCACCTAAACAGTCCAATTTTGAGCTCAAAACTAAGGCTTTTGCTCTGTCAGTTGAGTCAGGATCTGATGATATCATTGTGAAGAATCTCTACATTTCTATTGATCCCTATCAGATTAACCGCATGAAGAGTTATAGCTCTTCCCAGGGCACTATAAACTTTGCAGTGCCCATAACCCCAGGCGAGGCTATTGATGGTGCTGTTATTGGAAAAGTTGTGGCTTCTGGGAATGCTAAGTTTCAAAAAGATGATTTGGTGATGGGAGTATTCACTTGGGCAGAGTACAGTTTGGTCAAAGAAGGGAACATAATAAAAAAATTAGAGTCCTCTGAATTTCCACTCTCTTATCATCTTGGAGTTCTGGGATTCAATGGACTGTCAGCTTATGCGGGGTTTTTTGAATTGTGTAAACCCCTAAAGGGTGAAAAGGTCTTTGTCTCAACAGCTTCTGGAGCAGTTGGAAACTTGGTAGGGCAATATGCAAAGCTTTTAGGTTGTTATGTTGTTGGTTGTGCAGGGAGCCAGAAAAAGGTTGCATTGCTTAAAGAAAAGCTAGGATTTGATGATGCATTCAACTACAAGGAAGAAACAGATCTAAACTCCACTCTTAAAAGGTATTTTCCTGATGGAATTGATGTATATTTTGACAATGTTGGGGGTGAGATGCTGGAAGCAGCGGTTGCTAACATGAAAGCATTTGGAAGAGTGGCTATTTGTGGGGTAATATCTGAGTATACTAGTGCTGGAAAGAGAGCTTCACCAAACATGTTGGATGTTGTGTACAAGAGAATCAACATCAGAGGATTTTTAGCTGCTGATTTTCTGAATGTTTTTGAAGATTTTTCCACAAAAACTTCGGATTACATACGTACAGGGAAGTTGAAGGTGATTGAAGACTTGTCATTGGGGGTGGAGAGCATCCCTTCTGCTTTTGTTGGACTCTTCAAAGGGGATAACATTGGAAAGAAAATTATAAGTTTAACAGAAGAGTGA 1041 0.3958 MEVTNKYIVIKHHVEDAPKQSNFELKTKAFALSVESGSDDIIVKNLYISIDPYQINRMKSYSSSQGTINFAVPITPGEAIDGAVIGKVVASGNAKFQKDDLVMGVFTWAEYSLVKEGNIIKKLESSEFPLSYHLGVLGFNGLSAYAGFFELCKPLKGEKVFVSTASGAVGNLVGQYAKLLGCYVVGCAGSQKKVALLKEKLGFDDAFNYKEETDLNSTLKRYFPDGIDVYFDNVGGEMLEAAVANMKAFGRVAICGVISEYTSAGKRASPNMLDVVYKRINIRGFLAADFLNVFEDFSTKTSDYIRTGKLKVIEDLSLGVESIPSAFVGLFKGDNIGKKIISLTEE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1876 346 Gene3D - 8 341 - -
Gso6g1876 346 PANTHER PROSTAGLANDIN REDUCTASE 2 344 IPR045010 GO:0016628
Gso6g1876 346 SUPERFAMILY GroES-like 3 153 IPR011032 -
Gso6g1876 346 Pfam Zinc-binding dehydrogenase 168 289 IPR013149 -
Gso6g1876 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 290 IPR036291 -
Gso6g1876 346 Pfam N-terminal domain of oxidoreductase 6 119 IPR041694 -
Gso6g1876 346 SMART PKS_ER_names_mod 19 341 IPR020843 GO:0016491
Gso6g1876 346 Gene3D - 136 312 - -
Gso6g1876 346 PANTHER OS06G0602900 PROTEIN 2 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1876 Gso-Chr6 27130500 27142880 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1876 - - gmx:100808819 682.174