Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1874 ATGGTGTCTCCGAAGCAGCTCCTGGGCACCATCGAATCTGCGCTTCTCGGAACTTCGCCTCCGATGGCGGCGCACCGCGTCGAACTCTTGCACGCTCTCCGCACTTCTCGAACCTCCTTGCAGTCCCTTCTCTCGTATCCCCCCCCAAAGCCCTCTGATCGAAGTCAAGTTCAGTCAAAGTCAGTCAGACTTCCTGATTCTCCTCCTATTTCACTTGATGACCAGGATGTTCACATTGCGCTCAAATTGAGTGACGATCTCCATCTCAATGAAGTAGATTGTGTTCGTTTGCTTGTATCAGCTAATAAAGAGTGGGGCTTAATGGGAAGGGAACCACTGGAAATTTTACGGCTTGCAGCAGGACTCTGGTATACAGAGAGAAGAGATTTGATAACGTCCCTCCATTTGCTCTTAAGGGCTGTGGTGCTAGATCAGGGACTGCAAGATGATATATTGGTAGACATTCAAAAGTATTTGGAAGATCTTATCAGTTCTGGACTTAGACAGCGGTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGAGCCTTCTGGTTTGGGTGGTCCTCAGTGTGAGAGTTATGTTCTTGATTCAAGAGGCTCTCTTGTGGAGAGGCAGGCAGTGGTCTCTAGAGAAAGACTTATTCTGGGGCATTGTCTTGTGCTTTCGATTCTGGTTGTTCGGACATGCCCGAAGGATATAAAAGATATTTTTTCTGTTTTGAAGGATAGTGCTTCTGAAGTTAGTGAGAGCAATGCCACTGTAAAACATCAGATTACCTTTTGTCTTCTCTTTGCTCTTGTGATTGCATTTGTTTCTGATGGTTTGAGTACAGTGCCTGATAAAGCATCTGTCCTTTCTTCTAATACTTCCTTCAGACACGAATTTCATGAACTTGTAATGACTACTGGGAATGATCCACATGTTGAGGGCTTTGTTGGTGGCATAAGGCTTGCTTGGGTGGTACATTTGATGTTAATACAAGATGGTGTTCCAGCTAGAGAGACTATTTCAAGTGGTTCATCAAATGAACTGGGTTATCTTAGTCAATGCTTGGAAGCCATTTTCTCAAATAATGTTTTTCAGTTTTTACTTGATAAAGTTCTTCGTACTGCTTCCTTCCAGACTGAAGACGAAGATATGATCTACATGTACAATGCTTATCTGCACAAGCTGATTACGTGCTTCTTGTCTAACCCTCTTGCAAGAGACAAGATAAAAGAATCCAAGGAGCGGATTATGAGTGTGCTTAGTCCATACCGAGTTGTGGGATCACATGATTTTGCACAGGACAGTAATTCAAGTTCTCTACATGGCACTGAGATGGGCCCTTTACCATTTAATTCAATCTTGGACTTTGTGAGCGAAATTTATCAGAAAGAACCAGAGCTCTTGTCGGGCAATGATGTGTTGTGGACGTTTGTAAATTTTGCTGGAGAGGACCATACGAATTTCCAAACGCTTGTGGCGTTCTTGAATATGCTGAGCACCTTGGCTTGTAGTCAAGAAGGTGCTTCAAAGGTTTACGAGTTGCTGCAAGGTAAAGCATTCCGTTCAATTGGATGGAGCACTTTATTTGAATGCTTAACAATTTATGATGAGAAATTCAAACAGTCTCTTCAAACTGCGGGAGCAATGCTGCCTGAAATTCAGGAGGGGGATGCCAAAGCCCTTGTGGCATACTTGAATATTCTAAAGAAGGTTGTAGAAAATGGGAACCCAACAGAAAGGAAAACCTGGTTTCCTGATATTGAACCATTGTTCAAACTTCTTAGTTACGAAAATGTACCCCCTTATCTTAAGGGTGCTCTAAGGAATGCAATAGCCACATTTATTAAGGTCTCTCCAGTGCTGAAGGATAGCATCTGGACCTATCTTGAGCAATATGATCTGCCAGTGGTTGTTGGGCTTGATATCCCAAACAGTCCACAATCTATGGGTACTCAGGTTTATGATATGCAATTTGAACTGAACGAGATTGAAGCAAGGAGAGAACAATATCCTTCAACTATATCTTTCCTTAATTTGATAAATGCTCTAATTGCAGAAGAAAGAGATTTGTCTGATAGAGGGCGAAGATTTATTGGAATATTTAGGTTCATCTATGATCATGTTTTTGGGCCATTTCCTCAGAGAGCCTATGCGGATCCCTGTGAAAAATGGCAGTTAGTTGGTGCATGCCTTAAACATTTTCACATGGTATTAAGCATGTACGACATCAAGGATGAGGACTACGAGGGTGTAGTTGATCAGTCACGACTTTCAGCAACTAAAGAATCATCACCACTTCAGACACAGCTCCCAGTTTTAGAGTTGCTGAAAGATTTCATGAGTGGAAAGACTGCCTTCCGGAACATAATGAGTATTCTTCTGCCAGGGGTGAATTCTGTTATTGCTGAACGCAGTAGTCAATTATATGGGCAACTTTTAGAGAATGCAGTGCAGCTTTCTCTGGAAATTATAATCCTTGTCCTTGACAAAGATTTACTTCTTTCTGATTATTGGCGTCCTCTATACCAGCCATTAGATATTATACTCTCCCATGATCATAATCAAATAGTGGCCCTCTTGGAGTATGTCAGATATGATTTTCAGCCAAAAGTTCAGCAATCCTCCATCAAAATCATGAGTATTTTAAGCTCTCGCATGGTTGGGCTTGTTCAACTATTGCTAAAATCTAATGCATCAAACAGCTTGATAGAAGATTATGCAGCCTGCCTTGAGTTACGGTCAGAAGAGCTTCAGAATCTTGAAAATAACAATGATGATCCAGGCATTCTTATTATGCAACTTCTAATTGACAATATCAGCCGGCCAGCCCCTAATATCACTCATTTACTGCTTAAATTTGATCTAGACACACCTATTGAGCGGACAGTTTTACAGCCTAAATTTTATTACAGTTGCATGAAGGTTATTCTTGATATCCTGGAAAAGCTTTTGAAGCCTGGTGTAAATGCATTACTTCATGAATTTGGTTTTCAGCTGCTTTATGAATTGTGTGTAGATCCACTAACAAGTGGACCAACAATGGATCTGTTGTCAAATAAAAAGTACCTATTCTTTGTTAAGCACCTTGATACAATTGGTATTGCCCCACTTCCTAAACGAAATAGCAACCAGTCACTTCGTAACAGTTCCCTTCATCAGAGAGCATGGCTTTTGAAACTTTTAGCGGTTGAACTACATGCTGGTGATGTTAGGAGCTCCAATCATAGAGAAGCATGTCAGACAATCCTTTCTTATCTTTTTGCCCATGGTCTTAATGACATTGGTGGGGGCCAGGCCATGCCTCCATTTTTGCTTCATGATACTTCTGAAAATGCTGCTATAAGAACTGTCAGCAAGAGTAAGGTATTAGAATTGCTTGAAATCATTCAGTTTAGATGTCCAGATTCCACTACTCAGCTCTCAAATATTGTGGCTGGTATGAAATATGACTTGCCGGCAGAAGACATACTTGGAAATCCGGGAAATTCCGGAAAGGGTGGTGTGTACTATTATTCCGAGAGAGGTGATCGGCTAATTGACCTTGCTTCTTTCCATGACAAACTTTGGCAGAAATATAATTCAGCATATGCCCAGGCAAGTAACCTTGGCAGTGAAGTTGAACTTAATAATGTTCGTGAGACAATTCAACAGTTGCTGAGATGGGGTTGGAAATACAATAAAAATCTTGAGGAACAAGCTGCACAACTTCATATGTTGACTGCTTGGTCTCAGATTGTTGAGGTGTCTGCTTCTAGAAGATTAACAATGCTTGAAGATCGATCTGAAATTCTTTTTCAGGTCCTTGATGTGTCTCTTAGTGCATCTGCTTCTCCTGACTGTTCATTGAGGATGGCATTCATACTATCACAGGTAGCATTGACATGCATGGCTAAGCTGCGAGATGAAAGATTTTTGTTCCCTGGCAGTCTGAGTTCTGATAACATCACATGCCTTGATCTCATTGTGGTGAAGCAATTATCAAATGGTGCTTGTCTGACCATATTGTTTAAGCTTATCATGGCAATTCTTAGAAATGAATCTTCAGAAGCTCTTAGGAGACGTCAATATGCTCTACTTCTTAGCTATTTCCAGTATTGCCAAAATGTGGTTGATCCTGATGTTCCAACCACCGTTCTTCAATTCTTGCTGCTCAGTGAACAAGATAATGAATATATTGATCTCCCAAAGATTGACAAAGAACAAGCAGAACTGGCTCGTGCAAACTTTTCAACTTTGAGGAAAGAAGCTCAGAGCATTTTGAATCTGGTCGTAAAAGATGCAACCCATGGTAGTGAACCTGGAAAGACAATATCACTTTATGTTCTTGATGCATTGATTAATATAGATCATGAGCGCTTTTTCTTGAGCCAACTTCAAAGCAGGGGTTTTTTAAGGTCTTGCTTTACAGCCATAAGCAATGTTTGCAATCAGGATGGTAGTCTTTCACTGGACTCATTGCAGAGGGCATGCACTTTTGAGGCTGAACTTGCTTTACTACTAAGAATCAGTCACAAGTATGGAAAATCCGGAGCACAGATTTTATTTTCCATGGGCATATTGGAGCATCTTGCATCTGGCAGAGCAATCAATTTACAGGGAAGTTTAAGGTGGGTTGAGACAAGACTTAGAAGAGATATGGCTGTGGATGTTGATAGACAACGGATGATTATTACTCCAGTCTTGAGATTAGTGTTTTCACTAACTTCCTTGGTTGATACATCTGACTTTTTGGAGGTTAAGAATAAAATTGTCCGTGAAGTAATCGATTTTATCAAAGGGCATCAATCACTGTTTGATCAAGTTCTCCGTTTAGACATTGCCGAGGCAGATGAACTAAGAACAGAGCAGGTCAATTTAGTTGTTGGTATTCTTAGCAAGGTTTGGCCATATGAAGAGAGCAATGAGTACGGTTTTGTTCAAGGGCTTTTTGGTCTGATGCATGCTCTTTTCTCACGTGATTCAAAGATTCCTAGTTTTGCTCAATCAAGAGTATCACCTGAGAATCAGAGGAATTCAGAACTACAGATGTTTAATTTGTGCTACAGCCTGAGCTCTTACTTGTATTTTCTAGTCACAAAGAAATCCCTGAGATTACAGCCTTCAGATGCCTGTTCCAGTTACGCTGCTTCTGTTGAACTTCAACAACCCACATTGAGCTTGCTTAATTCTCTTCTTTTTTCTGTCACAACTGCTTTTGAAAGGGCAGCTGAGGAGAAATCCTTGTTACTGAATAAGATTCGAGACATAAATGAACTGTCAAGGCAGGAAGTTGATGAAATCATCAATATGTGTGTCCGGCAAGACTCTGTTTCATCTTCAGATAACATACATAAAAGGAGGTACATTGCAATGGTAGAAATGTGTCGAGTTGTTGCTAGTAGGGATCAGCTAATCATTTTATTACTGCCACTCTCTGAACATGTGCTAAATATCATCCTTATCCATCTTCAAGAGAGCTCTGTTGCACTCGATTCTACCTTGAGTACAAAAACAATTGCATATGGTGCCAAATATGATGCACAACAGGACGTTGCTATGTTATATGGAAAGTTAGTTCCAACCCTTGAGCGACTTGAGTTGCTGAGTGAGGAGAAAGTAGGGCACAATCTCAAAGTATTCCGCAGATTAGCAACTTCTGCCAAAGATCTTGCAATTCAAAAATTGATTGTGTAG 5664 0.407 MVSPKQLLGTIESALLGTSPPMAAHRVELLHALRTSRTSLQSLLSYPPPKPSDRSQVQSKSVRLPDSPPISLDDQDVHIALKLSDDLHLNEVDCVRLLVSANKEWGLMGREPLEILRLAAGLWYTERRDLITSLHLLLRAVVLDQGLQDDILVDIQKYLEDLISSGLRQRLISLIKELNREEPSGLGGPQCESYVLDSRGSLVERQAVVSRERLILGHCLVLSILVVRTCPKDIKDIFSVLKDSASEVSESNATVKHQITFCLLFALVIAFVSDGLSTVPDKASVLSSNTSFRHEFHELVMTTGNDPHVEGFVGGIRLAWVVHLMLIQDGVPARETISSGSSNELGYLSQCLEAIFSNNVFQFLLDKVLRTASFQTEDEDMIYMYNAYLHKLITCFLSNPLARDKIKESKERIMSVLSPYRVVGSHDFAQDSNSSSLHGTEMGPLPFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLACSQEGASKVYELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNILKKVVENGNPTERKTWFPDIEPLFKLLSYENVPPYLKGALRNAIATFIKVSPVLKDSIWTYLEQYDLPVVVGLDIPNSPQSMGTQVYDMQFELNEIEARREQYPSTISFLNLINALIAEERDLSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLKHFHMVLSMYDIKDEDYEGVVDQSRLSATKESSPLQTQLPVLELLKDFMSGKTAFRNIMSILLPGVNSVIAERSSQLYGQLLENAVQLSLEIIILVLDKDLLLSDYWRPLYQPLDIILSHDHNQIVALLEYVRYDFQPKVQQSSIKIMSILSSRMVGLVQLLLKSNASNSLIEDYAACLELRSEELQNLENNNDDPGILIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFYYSCMKVILDILEKLLKPGVNALLHEFGFQLLYELCVDPLTSGPTMDLLSNKKYLFFVKHLDTIGIAPLPKRNSNQSLRNSSLHQRAWLLKLLAVELHAGDVRSSNHREACQTILSYLFAHGLNDIGGGQAMPPFLLHDTSENAAIRTVSKSKVLELLEIIQFRCPDSTTQLSNIVAGMKYDLPAEDILGNPGNSGKGGVYYYSERGDRLIDLASFHDKLWQKYNSAYAQASNLGSEVELNNVRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSASRRLTMLEDRSEILFQVLDVSLSASASPDCSLRMAFILSQVALTCMAKLRDERFLFPGSLSSDNITCLDLIVVKQLSNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCQNVVDPDVPTTVLQFLLLSEQDNEYIDLPKIDKEQAELARANFSTLRKEAQSILNLVVKDATHGSEPGKTISLYVLDALINIDHERFFLSQLQSRGFLRSCFTAISNVCNQDGSLSLDSLQRACTFEAELALLLRISHKYGKSGAQILFSMGILEHLASGRAINLQGSLRWVETRLRRDMAVDVDRQRMIITPVLRLVFSLTSLVDTSDFLEVKNKIVREVIDFIKGHQSLFDQVLRLDIAEADELRTEQVNLVVGILSKVWPYEESNEYGFVQGLFGLMHALFSRDSKIPSFAQSRVSPENQRNSELQMFNLCYSLSSYLYFLVTKKSLRLQPSDACSSYAASVELQQPTLSLLNSLLFSVTTAFERAAEEKSLLLNKIRDINELSRQEVDEIINMCVRQDSVSSSDNIHKRRYIAMVEMCRVVASRDQLIILLLPLSEHVLNIILIHLQESSVALDSTLSTKTIAYGAKYDAQQDVAMLYGKLVPTLERLELLSEEKVGHNLKVFRRLATSAKDLAIQKLIV* 1888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1874 1887 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1694 IPR021827 GO:0005643
Gso6g1874 1887 MobiDBLite consensus disorder prediction 43 69 - -
Gso6g1874 1887 Coils Coil 900 920 - -
Gso6g1874 1887 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 27 1610 IPR021827 GO:0005643
Gso6g1874 1887 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1694 - -
Gso6g1874 1887 MobiDBLite consensus disorder prediction 43 65 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1874 K14310 - gmx:100777616 3614.31