Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1828 ATGAGCTTCGCTGCACCATCACTTGGTTCTGCTGGTGGTAGATCTGCTAGAAGAGCATTTGAGTTTGGGAGAACCTATGTTGTCAGGCCTAAAGGTAAACACCAAGCAACTATAGTCTGGTTGCATGGCCTCGGGGATAATGGCTCCAGTTGGTCCCAGCTATTAGAGACCCTTCCTCTTCCAAATATTAAATGGATATGTCCGACTGCTCCTACTCAGCCAATATCTATATTTGGTGGCTTTCCGTCTACTGCTTGGTTTGATGTTGGAGATATTTCAGAAGATGCTCCTGATGATCTAGAAGGTTTGGATGCTTCAGCTGCACATGTTGCGAATTTGCTGTCTACAGAACCTGCAGACATTAAGCTTGGTGTTGGAGGGTTCAGTATGGGTGCAGCTACTGCCCTGTACTCTGTGTCCTGCTTTACTGCTGGAAAATATGGGAATGGCAATCCTTATCCAGCCAACCCAAGTGCAGCTGTTGGTTTAAGTGGCTGGCTTCCGTGCTCAAAGACCTTGAGTAACAAGTTACAAGGGGTAGATGAAGCTACAAGGCGTGCTCAGTCCTTTCCTGTTTTGCTGTGTCATGGAAAAGTTGACGATGTTGTTCCTTATAAGTTTGGTGAGAAATCATCAAAGTGCTTAAGTTCAACTGGATTTCAGGATGTAACTTTTAAAGCTTATAACGGGCTTGGACACTACACCATTCCAGAAGAGATGGATGAGGTTTGTGCTTGGCTAACATCAAAATTGGGCCTTGAGGGGAACATTGCTTAG 777 0.4517 MSFAAPSLGSAGGRSARRAFEFGRTYVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTQPISIFGGFPSTAWFDVGDISEDAPDDLEGLDASAAHVANLLSTEPADIKLGVGGFSMGAATALYSVSCFTAGKYGNGNPYPANPSAAVGLSGWLPCSKTLSNKLQGVDEATRRAQSFPVLLCHGKVDDVVPYKFGEKSSKCLSSTGFQDVTFKAYNGLGHYTIPEEMDEVCAWLTSKLGLEGNIA* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1828 258 Pfam Phospholipase/Carboxylesterase 26 247 IPR003140 GO:0016787
Gso6g1828 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Gso6g1828 258 SUPERFAMILY alpha/beta-Hydrolases 26 251 IPR029058 -
Gso6g1828 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 256 - -
Gso6g1828 258 Gene3D alpha/beta hydrolase 17 252 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1828 Gso-Chr6 22409623 22446629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1828 1 255 Acyl Lipid Metabolism Gene Families AT5G20060 74.902 1.47e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1828 K06130 - gmx:100791683 535.028