Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1816 ATGGCAACGTCCAACCTCTCCCACCAAACTGCACGGCCGTTCCCCACAGCGTGCGTCAGTTCCCGGCCACCAAGCGCCGCCGTTAACCTCCGGCGGCACCTCCCACCTCCTCCCAAGCCCAGAAAACTGACCCTCAAAACCAACAACCGCTCCAAGTGGGCCATTCAATTGAGCCTAGTGGAGCAAAGCCCACCAAAATCAACGTTCAACATGCAGCAACTCGTGGGCTTTCTCTACGACGATCTAACCCACCTCTTCGACGATCAAGGTATCGATCAAACGGCCTACGACGAACGCGTCTTCTTTCGAGACCCAATCACCAAACACGACACTTTGAGTGGCTACCTCTTCAACATTGCACTTCTAAAAAATCTCTTCAGGCCCCAATTTCAGTTGCATTGGGTCAAACCGACAGGACCGTATGAGATAACTACACGGTGGACCATGGTTATGAAATTCGTGCTACTTCCTTGGAAACCGGAACTGATCTTTACAGGAACTTCCGTTATGGGCATTAACCCAGAAAATGGCAAGTTCTGTAGCCACGTGGACTTTTGGGATTCAATAGAGAAAAATGAGTATTTTTCTTTTGAAGGTTTGTTGGATGTAATCAAACAGTTGAGGATTTATAAGACACCAGAATTGGAATCACCCAAATATCAAATATTGAAAAGGACGGAAAATTATGAGGTTAGACAGTACAATCCATTCATAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGTCTACTGGCTTCAATGATGTTGCTGGATATATATTTGGAAAGAATTCCACAACAGAGAAGATACCAATGACTACTCCTGTATTCACGGAAACCAATGATGCTGACCTGTCCAAAGTGTCAATCCAAATAGTTCTTCCATTAGACAAAGAAACAGAAAGTTTACCAAATCCTAATCAAGAAACAGTTCGCTTGAGAAAGGTTGAAGGAGGCATTGCTGCAGTAATGAAGTTTAGTGGAAAGCCCACAGAGGATACTGTTCGTGAAAAGGAGAAAACCCTGCGTGCCAATATCATTAAAGATGGTCTTAAGCCTCAATCTGGTTGTTTGCTTGCACGGTACAATGATCCAGGTCGAACATGGACCTTTATAATGACCACAGGAAGTGCACATGGATCGTGTCAGGATAGTAATGTGATAGAATACCGCAGCAACCGCAACAAGCATGACCCAAAAGGAACGTGCAAAGACCCACGTACCTGCTGGACTACATAG 1239 0.4512 MATSNLSHQTARPFPTACVSSRPPSAAVNLRRHLPPPPKPRKLTLKTNNRSKWAIQLSLVEQSPPKSTFNMQQLVGFLYDDLTHLFDDQGIDQTAYDERVFFRDPITKHDTLSGYLFNIALLKNLFRPQFQLHWVKPTGPYEITTRWTMVMKFVLLPWKPELIFTGTSVMGINPENGKFCSHVDFWDSIEKNEYFSFEGLLDVIKQLRIYKTPELESPKYQILKRTENYEVRQYNPFIVVETNGDKLSGSTGFNDVAGYIFGKNSTTEKIPMTTPVFTETNDADLSKVSIQIVLPLDKETESLPNPNQETVRLRKVEGGIAAVMKFSGKPTEDTVREKEKTLRANIIKDGLKPQSGCLLARYNDPGRTWTFIMTTGSAHGSCQDSNVIEYRSNRNKHDPKGTCKDPRTCWTT* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1816 412 Pfam SOUL heme-binding protein 215 366 IPR006917 -
Gso6g1816 412 SUPERFAMILY NTF2-like 81 187 IPR032710 -
Gso6g1816 412 MobiDBLite consensus disorder prediction 1 16 - -
Gso6g1816 412 Pfam Uncharacterized conserved protein (DUF2358) 73 182 IPR018790 -
Gso6g1816 412 PANTHER SOUL HEME-BINDING FAMILY PROTEIN 54 374 - -
Gso6g1816 412 MobiDBLite consensus disorder prediction 1 44 - -
Gso6g1816 412 SUPERFAMILY Probable bacterial effector-binding domain 206 368 IPR011256 -
Gso6g1816 412 Gene3D Regulatory factor, effector binding domain 214 373 IPR011256 -
Gso6g1816 412 PANTHER HEME-BINDING PROTEIN-RELATED 54 374 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1816 Gso-Chr6 22022966 22029091 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1816 - - gmx:100789568 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1247 4 30857084 30866310 Gso6g1816 6 22022966 22029091 GST