Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1793 ATGGTTGCAACAGCTGCTACGGCGTCGTTTCTCCCTGTGCCTTCGCCGGACGCTGGAAAAGGGAAACCCAAGGGTGGTGGTGGCGGCGGCGTTTCTGTGAACCTCGGAGGACTCAAAGAGAAGCAAGGTTTGTGCGGTTGCTTGCAGGTCAAGGCAAACGCACAAGCCCCTCCGAAGACCATGGAGAAGGTTGAGAATGATTTGCCATGGTTGCCGTCGTCGTCGATTTCGCACGCCCCGAGGACTTTTATAAATCAGTTACCTGACTGGAGCATGCTTCTGGCCGCCATCACCACCGTGTTCCTCGCGGCGGAGAAGCAGTGGATGATGCTGGATTGGAAGCCGCGCCGCCCCGACATGCTCATTGACCCCTTTGGGATTGGGAAGATCGTGCAGGACGGGCTCGTGTTCAGGCAGAACTTCCCCATAAGGTCTTACGAAATTGGCGCAGACAAAACTGCGTCAATAGAGACCTTAATGAATCATTTGCAGGAGACTGCACTTAATCATGTTAAGACCGCTGGGCTTCTAGGTGATGGATTTGGTTCCACGCCTGAAATGTGTAAGAAGAACCTGATATGGGTGGTGACTAAGATGCAGGTTGTGGTTGATAAATATCCTACATGGGGTGATGTTGTTCAAGTAGACACGTGGGTTTCTGCATCAGGGAAGAATGGTATGCGTCGTGATTGGCTTGTGCGTGACGCCAAAACTGGTGAAATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGAAGACTGTCTAAAATTCCCGAAGAAGTCAGGGCAGAGATAAGCTCTTATTTTGTGGATTCTGCTCCAGTTGTGCCAGAGGATAACAGAAAACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCCAGATGGCATGATCTAGATGTGAATCAGCATGTTAACAATGTGAAGTATGTTGGGTGGATTCTGGAGAGTGCTCCGCAGCCACTTTTGGAGAGCCATGAGCTATGTGCCATGACATTGGAGTACAGGAGGGAGTGTGGCAGGAACAGTGTGCTAGATTCCCTCTCTGATCTCTCCGGTGCTGATGTTGGAAACTTAGCAGATGATGGATTTTTTGAGTGCAAGCACTTGCTTCGACTTGATGATGGTGCTGAGATTGTGAGGGGCAGGACCGAATGGAGGCCAAAACCCTTAAACAGAAACTTTGGTCATGTTTTGAGTCAGGTTCCTGTTCCAGCAGAAAGCACCTGA 1260 0.4944 MVATAATASFLPVPSPDAGKGKPKGGGGGGVSVNLGGLKEKQGLCGCLQVKANAQAPPKTMEKVENDLPWLPSSSISHAPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVFRQNFPIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDKYPTWGDVVQVDTWVSASGKNGMRRDWLVRDAKTGEILTRASSVWVMMNKVTRRLSKIPEEVRAEISSYFVDSAPVVPEDNRKLTKLDDSANFIRTGLSPRWHDLDVNQHVNNVKYVGWILESAPQPLLESHELCAMTLEYRRECGRNSVLDSLSDLSGADVGNLADDGFFECKHLLRLDDGAEIVRGRTEWRPKPLNRNFGHVLSQVPVPAEST* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1793 419 CDD 4HBT 137 253 - -
Gso6g1793 419 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 401 IPR045023 GO:0006633|GO:0016297
Gso6g1793 419 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 283 IPR029069 -
Gso6g1793 419 Pfam Acyl-ATP thioesterase 1 123 IPR021113 GO:0016790
Gso6g1793 419 Pfam Acyl-ACP thioesterase 134 397 IPR002864 GO:0006633|GO:0016790
Gso6g1793 419 Gene3D Hotdog Thioesterase 127 402 - -
Gso6g1793 419 MobiDBLite consensus disorder prediction 1 27 - -
Gso6g1793 419 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 295 407 IPR029069 -
Gso6g1793 419 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1793 Gso-Chr6 21031698 21036678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1793 1 406 Acyl Lipid Metabolism Gene Families AT1G08510 71.913 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1793 K10781 - gmx:100781381 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1793 6 21031698 21036678 Gso6g1793 6 21031698 21036678 ECH
Gso4g1269 4 32681053 32685964 Gso6g1793 6 21031698 21036678 GST