Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1752 ATGACGACGGTTCTATGCTGCAACGACGCCGCGCGGCCACACGTGCTGGTGATTCCATTCCCAGCGCAGGGCCACATGATCCCCCTCCTCGACCTAACCCACAACCTCATAACTTCCAACCCCACCCTCACCATTACTATCCTCACCACCCCAAAAAACAAACCCCTCGTTTCCACTCTCCTCTCCTCCCACCCTTCGATTCAAACCCTAATCCTCCCCTTCCCCTCTCACCCTTCTCTCCCTCCCGGCATCGAAAACGCCAAAGACATGCCCCTCTCCATTCGCCCCATCATGCTCTCTCTCTCCAACCTCCACCAACCTCTCACGAACTGGTTCCGCTCCCACCCTTCCCCTCCACGCTTCATCATCTCCGACATGTTCTGCGGATGGACCCAACCCCTCGCTTCCGAGCTCGGAATTCAAAGACTCGTCTTCTCCCCCTCCGGCGCCTTTGCGTACTCCACCATGTGCTTTCTCTGGAAGGAAACTCCAAAACGCGAAAACGAACAAGACCAAAACGAGGTCGTTTCGTTTCACAGGCTTCCTGATTCCCCGGAATACCCCTGGTGGCAAGTGTCTCCGTTGTTCCGCAGCTACCTGGAGGGAGATTTGGATTCGGAGAAGTTGAGGGATTGGTTTCTCGGAAACATTGCTAGCTGGGGACTTGTTCTGAATTCATTCGCGGAGTTGGAGAAGCCTTATTTTGAGTTTCTGAGAAAGGAATTGGGGCACGATCGTGTGTGGGCGGTTGGACCGTTGCTCCCTGAGGACGCGAATGAGGAGCGAGGAGGGTCGAGTTCGGTGTCCGTGAACGACGTCGTTTCTTGGTTGGATGAAAAGGAAGATTTAAAAGTGGTGTATGTTTGTTTCGGGAGCATGGCTATTCTGTCCAAGGATCAAACGGAGGCGATTCAAACAGCGTTGGCCAAGAGTGGGGTCCACTTTATATGGTCAACCAAAGAAGCGGTCAACGGGAACCAAGAGACTGATCGAAACGAGAGAGGGCTTGTGATTAGGGGGTGGGCCCCGCAGGTGGTGATTCTTCGGCACCGTGCGGTGGGCGCGTTCTTGACTCACTGCGGGTGGAACTCGGTGATGGAATCGGTGGTGGCGGGGGTGCCGATGCTTGCGTGGCCTATGACAGCGGACCAATACACGGACGCCACGTTGCTCGTGGATGAACTGAAGGTGGCAAAGAAGGTGTGCGAGGGGGAGAACACCGTTCCTGACTCGGACGTGTTGAGTCGAGTTCTGGCTGAGTCGGTGAGTGGAAACGGCGCGGAAGTGAGGCGGGCGTTGCAACTGAAGACGGCCGCGCTTGACGCCGTCAGAGAGGGTGGAAGCTCCGACAGGGATTTGCGGTGTTTGATGGAACGGCTACGTTTTCCGTTACAGTAG 1398 0.5579 MTTVLCCNDAARPHVLVIPFPAQGHMIPLLDLTHNLITSNPTLTITILTTPKNKPLVSTLLSSHPSIQTLILPFPSHPSLPPGIENAKDMPLSIRPIMLSLSNLHQPLTNWFRSHPSPPRFIISDMFCGWTQPLASELGIQRLVFSPSGAFAYSTMCFLWKETPKRENEQDQNEVVSFHRLPDSPEYPWWQVSPLFRSYLEGDLDSEKLRDWFLGNIASWGLVLNSFAELEKPYFEFLRKELGHDRVWAVGPLLPEDANEERGGSSSVSVNDVVSWLDEKEDLKVVYVCFGSMAILSKDQTEAIQTALAKSGVHFIWSTKEAVNGNQETDRNERGLVIRGWAPQVVILRHRAVGAFLTHCGWNSVMESVVAGVPMLAWPMTADQYTDATLLVDELKVAKKVCEGENTVPDSDVLSRVLAESVSGNGAEVRRALQLKTAALDAVREGGSSDRDLRCLMERLRFPLQ* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1752 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 458 - -
Gso6g1752 465 ProSitePatterns UDP-glycosyltransferases signature. 341 384 IPR035595 -
Gso6g1752 465 Gene3D Glycogen Phosphorylase B; 10 274 - -
Gso6g1752 465 Gene3D Glycogen Phosphorylase B; 275 444 - -
Gso6g1752 465 PANTHER GLYCOSYLTRANSFERASE 10 458 - -
Gso6g1752 465 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 390 IPR002213 GO:0008194
Gso6g1752 465 CDD GT1_Gtf-like 13 444 IPR002213 GO:0008194
Gso6g1752 465 PANTHER UDP-GLYCOSYLTRANSFERASE 89A2 10 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1752 Gso-Chr6 19857400 19859046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1752 8 460 Glycosyltransferase AT1G73880 55.819 1.34e-180 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1752 - - gmx:100779428 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1752 6 19857400 19859046 Gso6g1752 6 19857400 19859046 ECH