Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1747 ATGACAGAGAACAACGAGAATGCTGAAATCCAAATCCGTGCCCTAACCGGCGAATCCATCATTCTTCCCATCACTCCCACCACAACCGTCCAACACCTCAAGCTTCTCCTCAACCGCTCTTTCCCTCCGGCCACCACCTCCCCCAATTTCCACCTCTTTTTCAAGGGAGACAAATTGCGATTGCAGACTCAAATCGGCTCTTTCCCCATCCAACACGGCGAGTTTCTTGTCCTCGTTCCCTTTGCCAAGAAGGAAAAGGAACCTTCTCGAACCCACGAATCGGACACGGTTTCGAATGTTCCAACCTCTACTACTCTCGCGGACTCCACGTGGTCCACCATAAAGGAGGATTTGTCACTTTTACACGACGACGACACCACTGAGAACTGCGACAATGCCTCTAATTCCGAGTCAAAAAAAGAGGAAATGTTGCAGACACAATCCATAGCGGGTTTGGGTTCTGAGAAGCAGATAGAGCTTCCATATCATCTCATATTAGACACATTGCAAGATAGTAGTGAGGGAGTTCTTGGAGAGCATAATTGCGAGGTTTTCGTGAAGGTTTTGGAGTCTGTGAATTGCTTATCGGACCTGCCTCTCGGACACTGCAAGTTGTTGAAACAAGCTTGTGAAAAAAGAGGTGGTGGTGGTGGCTTGAGAAAACGTGTCAGTGATGCTGCTATGTGTATTTGTTCACCGTGGTTGAAGATAGTCGTGAAGGCGTTTGCATTTGTGAACATTTTTTCCACGTTTCTTTATTTGCAGCGTAGGGAATTGACCTTAGTTCTGCTGGAAGAGGCGCTTAGCGAGCTTGCGAAGTTTGGGGTTAAACTTGGCCTTGATGACATAAAGCTTCTTTCGCTACTTTGTCCTCATCTGGTATGTTTTGGAGATGAAGTAGAAAAGACAAATTTTGGTGATGTCATTGTTGTTAACAATGCAACTGGCAATGATGATCAAGTTGAAGACAATCCTAAAAGAGTGCGCAAGTGGTTGTATGTTTCAAAGATTGTCAGTACATTGAAGAGAAGGGATAGCTCTTTCAGAAAAAGTTTAGGATGGGCTTTTGAGCAGCTTCCGTTTGAATTTGGAGATGAGATGACTGTGGGAATTTCCTTGGAAGAGCTGCTTGCAGCTGTCAAGGACCATGATTTTGTAGGAAAAGAAGACAAATTAAAACGTGTAAAGAGAAGCAAAACTACCTCAAAACCTGGCTTAAACAATATTGGGTGTCATGATACAAAGACATTACTGGCTGTGGACATGGTTGATCATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAAAAGCGATTTACAGTGAGATCCCAATTGAACTATCAGAGAAAATGAGATCTGTGCTGAAGTGTATTGGAGTTTCCAAATTTTACAGTCACCAGGCAGAGTCTATACAAGCTTCCCTTCATGGCAACAATGTTGCTGTGGCTACAATGACATCTAGTGGCAAATCCCTTTGCTATAACCTACCAGTTCTAGAAGTGTTGTCCAATAATTCTTCTTCATCTGCTCTGTACATATTTCCCACAAAGGCATTGGCTCAAGATCAACTAAGAGCTTTGTTACACATGACAAAAGGATTAGATATTGACTTAAATATTGGAATATATGATGGGGACACTTCTCACAATGAGAGGATGTGGCTACGTGATAATTCTAGATTGTTGATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCACCATCAACAATTTTGTCGGATTTTATCAAACCTAAGGTTTGTGGTAATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGTCACACTGCACTTATATTGAGGAGGTTAAAACGACTCTGTTCACATGTATATGGATCTGTTCCTTCTTTTGTTTTTTCTACTGCAACTTCTGCAAATCCTCGGCAGCATTCTATGGAACTTGCAAATTTATCTACTCTGGAGCTATTTCAGAATGATGGAAGTCCATCTACAAGGAAACTTTTTGTCCTTTGGAATCCTGCTTTGCGTCCAAAAGCTATCATTAAAAAGACTCAGTTTTCTAAGAGTACTGATGAGCTGGCAGATGAAAGTGCAAATTTTGTTCGCTCAAGCCCGATTGTGGATGTTTCACGCCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCTGTATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTTGTTTTATCCTATGCACGTGAGATTCTTCATGAGACAGCCCCGCATCTGGTGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTTCATTTTTTGGTGGTAAAATATGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGCCACTCTGCATCTAGGATTTCCTGGTAATATTGCAAGCTTGTGGCAACAAGCTGGTAGAGGTGGGAGGAGAGATAGACCATCTCTTGCTGTCTACGTTGCATTTGGTGGGCCTCTTGATCAATACTTCATGAAACATCCCAAGAAACTCTTTGAAAGACCAATTGAATGTTGCCATGTTGATTCCCAAAACAAGCAGGTTCTTGAACAACATTTGGTCTGTGCAGCTCATGAACACCCGTTGAGTGTGAACTATGATGAGCAATATTTTGGTCCTTGCTTGGAGAGTGTCATAATTTCTCTAAAAGCTAGAGGATACTTGAGTTCTGTTCTATCATCTGATTCTTCTAGAATATGGAACTACATTGGTCCAGAGAAATTACCCTCACACGCAGTCAATATCCGAGCAATTGAAACTTTAAGATACAGTGTCATAGATCAGAAAAAAAATGAAGTTCTTGAAGAGATAGAGGAAAGCAAGGCATTCTTTCAGGTATATGAAGGTGCTGTGTATATGTACCAGGGGAAAACCTATTTGGTTGAAAAAATAGATCTATCTAACAAAACTGCTTTCTGCAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATATTGCTTATCCAGTCAAGGTCGAAACCAACATGTTTCCAAAAACAAATGCCCGGGTTGATGTATGCAAAGTAACAACTACTTGGTTTGGCTTTTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATGCCGTTGATCTCGCACTTCCTCAATACTCATATGAGTCACAGGCAGTTTGGGTTCCTGTGCCACAGTCAATAAAAGAAGCAGTAAGCAAGCAAAATTATGATTTCCGTGGAGGTCTGCATGCTGCTTCACATGCAATTTTACATGTAGTGCCTTTACATATCACGTGCAACTTGTCTGACTTGGCTCCTGAGTGTCCAAACCCTCATGATAGCCGATATTACCCTGAAAGAATTCTAATATATGATCAACATCATGGAGGGTGTGGAATTTCAGTACAGGTTCAACCCTATTTCACAAAGTTCCTGGCAGCTGCACTAGAGCTTCTCACATGTTGCTGCTGCTCAGCGGAAGTAGGTTGCCCTAATTGCGTTCAGAGCTTTGCTTGCCATGAGTATAACGAGGTTTTACACAAGGATGCAGCCATCATGATCATCAAGGGTATTCTGGATGCAGGGAACTAG 3648 0.4169 MTENNENAEIQIRALTGESIILPITPTTTVQHLKLLLNRSFPPATTSPNFHLFFKGDKLRLQTQIGSFPIQHGEFLVLVPFAKKEKEPSRTHESDTVSNVPTSTTLADSTWSTIKEDLSLLHDDDTTENCDNASNSESKKEEMLQTQSIAGLGSEKQIELPYHLILDTLQDSSEGVLGEHNCEVFVKVLESVNCLSDLPLGHCKLLKQACEKRGGGGGLRKRVSDAAMCICSPWLKIVVKAFAFVNIFSTFLYLQRRELTLVLLEEALSELAKFGVKLGLDDIKLLSLLCPHLVCFGDEVEKTNFGDVIVVNNATGNDDQVEDNPKRVRKWLYVSKIVSTLKRRDSSFRKSLGWAFEQLPFEFGDEMTVGISLEELLAAVKDHDFVGKEDKLKRVKRSKTTSKPGLNNIGCHDTKTLLAVDMVDHLKKGIGSEGQIVHIEDICARKAIYSEIPIELSEKMRSVLKCIGVSKFYSHQAESIQASLHGNNVAVATMTSSGKSLCYNLPVLEVLSNNSSSSALYIFPTKALAQDQLRALLHMTKGLDIDLNIGIYDGDTSHNERMWLRDNSRLLITNPDMLHISILPHHQQFCRILSNLRFVVIDETHTYKGAFGCHTALILRRLKRLCSHVYGSVPSFVFSTATSANPRQHSMELANLSTLELFQNDGSPSTRKLFVLWNPALRPKAIIKKTQFSKSTDELADESANFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYAREILHETAPHLVDSICAYRGGYIAEERRKIESSFFGGKICGVAATNALELGIDVGEIDATLHLGFPGNIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPKKLFERPIECCHVDSQNKQVLEQHLVCAAHEHPLSVNYDEQYFGPCLESVIISLKARGYLSSVLSSDSSRIWNYIGPEKLPSHAVNIRAIETLRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYMYQGKTYLVEKIDLSNKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVKVETNMFPKTNARVDVCKVTTTWFGFYRIWRGSNQIFDAVDLALPQYSYESQAVWVPVPQSIKEAVSKQNYDFRGGLHAASHAILHVVPLHITCNLSDLAPECPNPHDSRYYPERILIYDQHHGGCGISVQVQPYFTKFLAAALELLTCCCCSAEVGCPNCVQSFACHEYNEVLHKDAAIMIIKGILDAGN* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1747 1215 Pfam MrfA Zn-binding domain 1104 1186 IPR018973 -
Gso6g1747 1215 Gene3D - 703 884 IPR027417 -
Gso6g1747 1215 CDD Ubl_ubiquitin_like 10 79 - -
Gso6g1747 1215 CDD SF2_C_Hrq 674 838 - -
Gso6g1747 1215 Pfam DEAD/DEAH box helicase 474 643 IPR011545 GO:0003676|GO:0005524
Gso6g1747 1215 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 714 870 IPR001650 -
Gso6g1747 1215 SMART ultradead3 468 674 IPR014001 -
Gso6g1747 1215 Gene3D - 9 99 - -
Gso6g1747 1215 SMART helicmild6 748 829 IPR001650 -
Gso6g1747 1215 Pfam Helicase conserved C-terminal domain 721 827 IPR001650 -
Gso6g1747 1215 ProSiteProfiles Ubiquitin domain profile. 8 79 IPR000626 GO:0005515
Gso6g1747 1215 PANTHER ATP-DEPENDENT HELICASE HRQ1 22 1213 - -
Gso6g1747 1215 CDD DEXHc_Hrq1-like 472 653 - -
Gso6g1747 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 847 IPR027417 -
Gso6g1747 1215 SUPERFAMILY Ubiquitin-like 3 92 IPR029071 -
Gso6g1747 1215 Gene3D - 444 663 IPR027417 -
Gso6g1747 1215 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 480 661 IPR014001 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1747 - - gmx:100819522 2359.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1747 6 19631828 19643931 Gso6g1747 6 19631828 19643931 ECH