Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1739 ATGTCGTCGCCGGGAAGCGCAGCAGCAACGGCGATTCTGAAGGAAGAGGTGGACATAGTGATCCCTACGATACGTAACCTGGACTTCTTGGACATGTGGAGGCCATTCTTCGAGGGATACCATTTGATAATAGTGCAGGACGGTGATCCTTCGAAAGTTATCAAGGTTCCTGAAGGGTTTGATTATGAACTCTATAACCGCAACGACATCAACCGCGTTCTTGGCCCCAAGGCACACTGCATCTCCTTCAAAGACTCTGCTTGTCGCTGTTTCGGATTCTTGTTGTCTAAGAAGAAGTACATCTTCACCATTGATGATGACTGCTTCGTTGCAAAAGATCCTTCTGGCAAAGAAATTAATGCCCTGGAGCAGCACCTCAAGAACCTTCTCAGTCCATCAACCCCATTTTTCTTCAACACCCTCTATGATCCATACAGAGAGGGCGCAGATTTTGTCCGTGGATACCCATTTAGTCTGCGTGAAGGTGTTCCCACAGCTGCTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCCCCAACTCAGCTGGTCAAGCCTCTAGAGAGAAACAATAGGTATGTGGATGCTGTTATGACTATCCCAAAGGGGACCCTCTTTCCCATGTGTGGTATGAATTTGGCATTCAACCGGGAACTAATTGGTCCTGCAATGTACTTTGGACTCATGGGTGATGGTCAACCTATTGGACGTTATGATGACATGTGGGCTGGTTGGTGCGTCAAGGTGATAAGTGATCATCTAGGATTGGGGGTGAAGACAGGATTGCCTTACATCTGGCACAGCAAAGCCAGCAACCCATTTGTAAACCTAAAGAAGGAGTACAAAGGAATTTACTGGCAAGAAGAGCTGATCCCATTTTTCCAATCTGTTTCTCTTCCAAAGGAATGCACGACTGCTCAGAAATGTTACATTGAACTCTCCAAGCAAGTGAAGGCAAAACTTGGCAAGGTTGATGAGTATTTCAACAAGCTTGCAGATGCTATGGTGACATGGATTGAAGCTTGGGATGAACTAAACCCATCTGGGCCAAAATCTGAAGCATTGCCCAATGGTTCAGCAAAGTAA 1089 0.4628 MSSPGSAAATAILKEEVDIVIPTIRNLDFLDMWRPFFEGYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRVLGPKAHCISFKDSACRCFGFLLSKKKYIFTIDDDCFVAKDPSGKEINALEQHLKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTAASHGLWLNIPDYDAPTQLVKPLERNNRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVISDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKECTTAQKCYIELSKQVKAKLGKVDEYFNKLADAMVTWIEAWDELNPSGPKSEALPNGSAK* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1739 362 PANTHER UDP-ARABINOPYRANOSE MUTASE 3 5 353 - -
Gso6g1739 362 PANTHER UDP-ARABINOSE MUTASE 5 353 IPR037595 -
Gso6g1739 362 SUPERFAMILY Nucleotide-diphospho-sugar transferases 39 246 IPR029044 -
Gso6g1739 362 PIRSF UPTG 7 351 IPR004901 GO:0016866|GO:0071669
Gso6g1739 362 Pfam Reversibly glycosylated polypeptide 13 347 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1739 Gso-Chr6 19391489 19394733 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1739 K13379 - gmx:100816315 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1739 6 19391489 19394733 Gso6g1739 6 19391489 19394733 ECH