Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1733 ATGAGGTGGGAAAAGGTGGAGGGAATAGGAAGAGAAGAAGGACCAGGGAAGAGGTGGGGCCACACTTGTAACGCCGTTAAAGATGGCAGACTTCTTTATCTCTTCGGCGGTTACGGCAAATTTAACTGTCAGACCAACAAAGTTCACGTCTTCGATACTCTGAAGCAGAGTTGGAGTGAACCAGCAATTAAGGGGCCCCCACCTACTCCTAGAGACAGCCATAGTTGCACCGTTATTGGTGATAATCTGTTTGTGTTTGGGGGTACTGATGGGACCAAGCTACTGAATGATTTGCAGATACTAGATACTTCTTCAAATACATGGGTTTTTCCAACTGTGAGAGGGGAGGCACCGGATGCACGAGAGGGCCATGATGCAGCACTTGTTGGCAAACGACTATTTGTGTTTGGTGGTTGTGGGAAATCTGCTGATAATATTAATGAGGTGTACTACAATGACCTTTACATATTGAATACAGAATTGTTCGTTTGGAACCGTGCTACAACATCAGGCACTCCTCCATCTCCTCGTGATGGCCATACTTGCTCATCTTGGAGAAACAAAATTATTGTGATAGGTGGTGAAGATGAAAATGATTCTTATCTGTCTGATGTCCACATCCTAGATACTGATACTCTAATCTGGAGTAAACTGTGTACGTCAGGCCAATTGTTGCCACCTCGAGCTGGTCATTCTACAGTTTCTTTTGGCATGAACTTGTTTGTTTTTGGGGGCTTTACGGATGCTCACAACCTATACAACGACCTGTATATGCTCAACATTGAGACTTGTGTGTGGACGAAGGTGGCAACTACACCTAATGGTCCTTCTGCTAGATTTTCTGTAGCTGGTGACTGTTTAGACCCATATATGAGTGGTGTTCTTGTGTTTGTTGGTGGTTGTAATAGAAATCTGGAGGCCCTGGATGATATGTATTACCTATACACAGGGATTGCACGGGAAAATGAACAGCGACCAGAGAAGTTATCCTTAAAGAAGCAATTGAAGCGGAAATGTCTAGAACAAAATCCCAATCTTGTCCGAAACCCAGTTATGTGTGGATATGGAGTGGGTGCTGCCAGTAACCAGCCTATGGAAATCTTGAACTGTAGCCAACCAAGCAGACTAAATATCCCAGTAAATCAGTCCCTGCTTCCTGGAAAGAAAATGTTTCAAGCCCAAGTTAAGGAAAAAAACTCAGCAGGATATACTATTGAAACCGTTATTGATGGAAAGCCTCTTCATGGAGTTCTGTTTAAAAACCAGCCTAACACTCTTATTCCAGTTCCTAATACTTCCAGTAGGAAAAGGCCTGTCAGTGAAATTTTAAGTCCTGCTTCAAATGGTATACATTCACAAAATGTAACAGCTTATAAAGTGCTCGGGCAGGACAGAATGCAAGATAAACGGGAATTACGGGGAGAGAGTTCAGAATCTCATGAATGCCATAAGGATGCTGATACTATTGTTGTATCAAGTAACCCGACAACTGTTGCTGAGTCCTTTAAGGTTTCTGTCAACCCAGAACCAGAAGCTGTTTCTTTGAATCGAAATGGTGATGAAAAAAATGACACACCAAAATCCTTAATTGAGAGCTTGAAAAACGATGGATCCAATGATGTGACAAGTTCCAAAGGTGAAATTCAAATTGGTGTTCAAATAAATGTGCCAGTTTCCAACTATGAAATTCCAACTCAAATGAGTGATGCACCAAACTGTAATGCTGATGTCCTGAAACCTGCAGCAGCTGAGATTATTGTGTGTCTGCCAAATGAAGGTGTAACAGGGGATTGCACAACTCCAAGGACAGAAGGACACAATGAACAAGCAAAATTAACTTGA 1842 0.4235 MRWEKVEGIGREEGPGKRWGHTCNAVKDGRLLYLFGGYGKFNCQTNKVHVFDTLKQSWSEPAIKGPPPTPRDSHSCTVIGDNLFVFGGTDGTKLLNDLQILDTSSNTWVFPTVRGEAPDAREGHDAALVGKRLFVFGGCGKSADNINEVYYNDLYILNTELFVWNRATTSGTPPSPRDGHTCSSWRNKIIVIGGEDENDSYLSDVHILDTDTLIWSKLCTSGQLLPPRAGHSTVSFGMNLFVFGGFTDAHNLYNDLYMLNIETCVWTKVATTPNGPSARFSVAGDCLDPYMSGVLVFVGGCNRNLEALDDMYYLYTGIARENEQRPEKLSLKKQLKRKCLEQNPNLVRNPVMCGYGVGAASNQPMEILNCSQPSRLNIPVNQSLLPGKKMFQAQVKEKNSAGYTIETVIDGKPLHGVLFKNQPNTLIPVPNTSSRKRPVSEILSPASNGIHSQNVTAYKVLGQDRMQDKRELRGESSESHECHKDADTIVVSSNPTTVAESFKVSVNPEPEAVSLNRNGDEKNDTPKSLIESLKNDGSNDVTSSKGEIQIGVQINVPVSNYEIPTQMSDAPNCNADVLKPAAAEIIVCLPNEGVTGDCTTPRTEGHNEQAKLT* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1733 613 Gene3D - 1 142 IPR015915 GO:0005515
Gso6g1733 613 MobiDBLite consensus disorder prediction 515 529 - -
Gso6g1733 613 MobiDBLite consensus disorder prediction 468 488 - -
Gso6g1733 613 MobiDBLite consensus disorder prediction 505 543 - -
Gso6g1733 613 Pfam Kelch motif 29 62 IPR011498 GO:0005515
Gso6g1733 613 Pfam Kelch motif 227 274 - -
Gso6g1733 613 PANTHER KELCH REPEAT DOMAIN 12 439 - -
Gso6g1733 613 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 12 439 - -
Gso6g1733 613 SMART kelc_smart 82 131 IPR006652 GO:0005515
Gso6g1733 613 SMART kelc_smart 31 81 IPR006652 GO:0005515
Gso6g1733 613 SMART kelc_smart 188 238 IPR006652 GO:0005515
Gso6g1733 613 SUPERFAMILY Galactose oxidase, central domain 205 305 IPR011043 -
Gso6g1733 613 MobiDBLite consensus disorder prediction 468 487 - -
Gso6g1733 613 Pfam Galactose oxidase, central domain 70 112 - -
Gso6g1733 613 Pfam Galactose oxidase, central domain 176 222 - -
Gso6g1733 613 Gene3D - 143 374 IPR015915 GO:0005515
Gso6g1733 613 SUPERFAMILY Galactose oxidase, central domain 12 236 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1733 Gso-Chr6 19254729 19264384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1733 106 314 Acyl Lipid Metabolism Gene Families AT3G05420 30.594 1.75e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1733 - - gmx:100785267 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1733 6 19254729 19264384 Gso6g1733 6 19254729 19264384 ECH