Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1718 ATGGAAGGTTTGGTGAGTTCTGGGATCAACACGGTTCGTGTTTTTGGCATTACAAAACACCAATCTCGTTTTCTTCCTTCATCAACTCTGCATCTGAGGAATAACAGTGTGTGTGGATTTGGAATTGGGGTTGAGAAGAAGGAGAAGAAACAGTGTTTCGTTGTGGCTGCTTCTGTTGGTGGCTCCAAAGTGGTCCATTTTGAGAACACACTCCCTTCCAAAGAGGTTCTTGAGCTTTGGAGAAATGGTGATGCTGTGTGCTTTGATGTGGATAGCACTGTGTGCTTGGATGAAGGGATTGATGAGCTTGCTGAATTCTGTGGGGCTGGAAAGGCAGTGGCTGAATGGACTGCTAGAGCGATGGGTGGTTCTGTTCCGTTTGAGGAAGCCTTGGCTGCTAGGCTGTCTTTGTTCAATCCCTCTTTGTCCCAGCTTCAGGATTTTCTTGAACAAAAGCCACCAAGGCTTTCCCCTGGCATTGAAGAGTTAGTCCAGAAGTTAAAGGCTAATGGCATAGTTGTTTATCTGATCTCTGGTGGCTTCCGTCAAATGATCAATCCTGTTGCATCAATACTTGGGATTCCACAAGAGAATATTTTTGCCAATCAACTGCTATTTCGAAGCTCTGGAGAGTTTCTGGGGTTCGATAAAAACGAGCCTACTTCAAGGAGTGGAGGAAAAGCTGTTGCAGTCCAACAAATCAAGAAGGCTCATGGTTTCAAAACTTTAACTATGGTGGGGGATGGTGCAACTGATTTTGAGGCTCGTAGACCTGGTGGTGCTGACATGTTCGTTTGCTACGCGGGTGTTCAACTTCGAGAGTCTGTTGCTGCAAAAGCTGATTGGCTAGTTTTCAGTTTTAAAGACCTCATAAATTCGTTGGGGTTTGTTTGTCGTGTATTGGGTGGTTCGTTGTTGGCATTGAGGACCTGCATCTTCGTTTTGTTGTTCCACCGTCGAGGCAGATAG 969 0.4561 MEGLVSSGINTVRVFGITKHQSRFLPSSTLHLRNNSVCGFGIGVEKKEKKQCFVVAASVGGSKVVHFENTLPSKEVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFNPSLSQLQDFLEQKPPRLSPGIEELVQKLKANGIVVYLISGGFRQMINPVASILGIPQENIFANQLLFRSSGEFLGFDKNEPTSRSGGKAVAVQQIKKAHGFKTLTMVGDGATDFEARRPGGADMFVCYAGVQLRESVAAKADWLVFSFKDLINSLGFVCRVLGGSLLALRTCIFVLLFHRRGR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1718 322 Gene3D Phosphoserine phosphatase; domain 2 96 146 - -
Gso6g1718 322 TIGRFAM serB: phosphoserine phosphatase SerB 78 278 IPR004469 GO:0006564|GO:0036424
Gso6g1718 322 CDD HAD_PSP_eu 84 287 - -
Gso6g1718 322 Gene3D - 147 294 IPR023214 -
Gso6g1718 322 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 85 256 - -
Gso6g1718 322 Pfam haloacid dehalogenase-like hydrolase 84 257 - -
Gso6g1718 322 PANTHER BNAA06G12800D PROTEIN 63 294 - -
Gso6g1718 322 SUPERFAMILY HAD-like 75 294 IPR036412 -
Gso6g1718 322 PANTHER PHOSPHOSERINE PHOSPHATASE 63 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1718 Gso-Chr6 18950439 18955905 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1718 K01079 - gmx:100814193 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1718 6 18950439 18955905 Gso6g1718 6 18950439 18955905 ECH