Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1714 ATGGCCTTGTTTGCTCTTGCAGTGCTTCTTTTAGCCTTCACTGGCTCTTCAAGTGCCACTTGGTGTGTTTGCAAGGAAGGAAGTGATGCAATATTGCAGAAAACCTTAGATTATGCTTGTGGAGCTGGGGCTGATTGTAACCCTTTGCATCAGAATGGCCCTTGTTTCCAACCCAACACTGTGAGAGCTCACTGTAACTATGCAGTTAACAGCTATTTCCAAAGGAAGGGTCAAGCACAAGGATCCTGTGACTTTGCAGGAACCGCCACTGTTACTGCATCAGATCCCAGCACTGGAGGTTGTTCCTACCCTGCAAGCGCCAGCACTGCAGGCACTGCCACAACCAGTGGCACCACCACTTCCTTTCCATACAGTTCCACCCCTGGAGTATTGGGAGGGATTGGCAGGGGTATGGGCCCTTCTGGAATTGGCACCAATTCAAATGATAGCCATGGTGGACTTAGACTTGTGGACACTAGTTTCTTCTTCATGCCCCTCTTTTCAGCCTTGGTGATGATCATGCTTCTTTGGTGGGGCTAA 540 0.4944 MALFALAVLLLAFTGSSSATWCVCKEGSDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQRKGQAQGSCDFAGTATVTASDPSTGGCSYPASASTAGTATTSGTTTSFPYSSTPGVLGGIGRGMGPSGIGTNSNDSHGGLRLVDTSFFFMPLFSALVMIMLLWWG* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1714 179 PANTHER BETA-1,3 GLUCANASE 1 166 IPR044788 -
Gso6g1714 179 Pfam X8 domain 20 90 IPR012946 -
Gso6g1714 179 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 166 - -
Gso6g1714 179 SMART X8_cls 20 103 IPR012946 -
Gso6g1714 179 Gene3D - 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1714 Gso-Chr6 18781434 18791069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1714 17 104 Glycoside Hydrolase AT4G34480 47.191 4.95e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1714 - - gmx:100812033 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1714 6 18781434 18791069 Gso6g1714 6 18781434 18791069 ECH