Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1689 ATGAGATTCCGCATTGCATTGTTTCTCTTTTTGGCTTCTCTTCAAGCCACTTTAAGTCAAGATATTGAACATGGTTCACTTCTAGTAGATGGAGCTCAGACTAAGGCTGAAACAGGTGATAACTTTATTTGTGCCACTATTGATTGGTGGCCTCATGATAAGTGTGACTATAACCATTGCCCTTGGGGATATTCTTCTGTTGTAAATTTGGACTTGTCTCATCCTTTCCTAGCCAAGGCAATCCAAGCCCTCAAGCCATTGAGGATAAGACTTGGAGGTTCTTTGCAAGACCGGGTGCTGTATGATGTAGGAAGTTTGAAGTCTCCTTGCCATCCCCTTCAAAGTGTTAAAGGTGAATTGTTTGGATTTTCAAAAGGATGTTTACACATGAAAAGGTGGGATGAGCTGAATCAGTTTTTCAACGAGACAGGGGCCATTGTGACATTTGGCTTGAATTTACTCCATGGGAAGCACCAGATTAGTCATAATGTTTGGGAAGGCGCCTGGGACCCTACAAATGCTTATAATTTTATAGAGTACACTATTTCAAAGGGATACAAGATTGATTCATGGGAACTTGGTAATGAGTTGAGTGGTAAGGGCATTGGTGCAAGTGTTGGTGTTGCACAATATGGGAAAGACTTGATAAAGCTTAAACAAATTCTAAGCACATTATACGAGAACTCCAATTTCAAGCCTTCACTTGTGGCACCTGGGGGATTTTATGAAAAGCATTGGTATGACAGGCTTCTTCAGGTTTCGGGTTCAGGCATAATCAATGTTCTGACTCATCATATATATAATTTGGGCCCAGGTAGTGACGAGCATCTTGAAAGGAAGATTCTAGATCCTGAACGCTTGAGCAGGGTGGAATCAATTTTCAGCAATCTTTCAGAAACCATTCAAAAATATGGTCCTTGGTGTTCTGCATGGGTTGGAGAAGCTGGAGGGGCATTCAACAGTGGTGGCAATGATGTTTCTAACAGATTTCTAAACAGCTTTTGGTACTTAGATCAACTTGGAATGGCATCCAGCTACAGCACTAAAGTCTATTGCAGGCAGACTTTAATTGGAGGAAACTATGGCCTTCTCAATACCACCACCTTTGCTCCCAATCCTGACTACTACAGTGCACTTTTGTGGCATCAGTTAATGGGGAAGAAGGTTCTTGCAGTTTCAAGTGATGTTTCTTCACCCTTTTTACGCACTTATGCCCATTGTGCAAAGGACAGAGCAGGTGTAACGTTACTTCTGATCAACCTAAGCAATCAGACTGATTTCATACTCACTGTTCGAAACCCGGTGACTGCAAGTGTTGTAGAAAATGAAGTGGCCACAGGCACCCATAAGGAAAGTTCATTCTTTGATAAACTCAAGAAAACATTTTCTTGGGTTGGAACAAAAGGGTCAGAGGTCACATTCAGAGAAGAGTACCACTTGACTCCAAAAGATGGTTACCTCAGAAGCCAAACCATGGTGCTGAATGGCATTCCATTGGAGTTAACAGACGAAGGAGATCTTCCACGGTTGGATCCAGTGCGCAATAACTTGCGATCTCCAATATACATGACTCCTTTGTCCATTGCATTTGTTGTATACCCTAACTTTGATGCTCCAGCTTGTGCTACTCACAGAAAACTTTAG 1644 0.4203 MRFRIALFLFLASLQATLSQDIEHGSLLVDGAQTKAETGDNFICATIDWWPHDKCDYNHCPWGYSSVVNLDLSHPFLAKAIQALKPLRIRLGGSLQDRVLYDVGSLKSPCHPLQSVKGELFGFSKGCLHMKRWDELNQFFNETGAIVTFGLNLLHGKHQISHNVWEGAWDPTNAYNFIEYTISKGYKIDSWELGNELSGKGIGASVGVAQYGKDLIKLKQILSTLYENSNFKPSLVAPGGFYEKHWYDRLLQVSGSGIINVLTHHIYNLGPGSDEHLERKILDPERLSRVESIFSNLSETIQKYGPWCSAWVGEAGGAFNSGGNDVSNRFLNSFWYLDQLGMASSYSTKVYCRQTLIGGNYGLLNTTTFAPNPDYYSALLWHQLMGKKVLAVSSDVSSPFLRTYAHCAKDRAGVTLLLINLSNQTDFILTVRNPVTASVVENEVATGTHKESSFFDKLKKTFSWVGTKGSEVTFREEYHLTPKDGYLRSQTMVLNGIPLELTDEGDLPRLDPVRNNLRSPIYMTPLSIAFVVYPNFDAPACATHRKL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1689 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 26 341 IPR005199 GO:0016020|GO:0016798
Gso6g1689 547 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 546 - -
Gso6g1689 547 SUPERFAMILY (Trans)glycosidases 40 385 IPR017853 -
Gso6g1689 547 Gene3D Glycosidases 62 384 - -
Gso6g1689 547 PANTHER HEPARANASE-RELATED 1 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1689 Gso-Chr6 18223106 18228721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1689 1 542 Glycoside Hydrolase AT5G07830 59.016 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1689 K07964 - gmx:100806170 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1689 6 18223106 18228721 Gso6g1689 6 18223106 18228721 ECH