Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1642 ATGGCATGTTCCATGAACAGTGTTTTCTGTGTTCCTGAATTAAATGAGAGCATATTTGGTTCCAAAACCAAAGGGGTTTTGTTGCCTTGTCCCTCAAAAACTGCCAATGCAAAATCATGGGGTTGTTCTGTTTTGAGCAATGCTTTCATGGGAAAATCCATTGCTCTTGGTGAGAAAGGCTCAGGATGTTGCAATTCAAAATTCTCCAGCAATGTTCCTGTTCATGCACAAGCAACAATTTGTGTCAGCAAGGCTTTGAAGTGGTGGAAGAAGACCCTAAAGCCTAATATGATTGAGATCCACTCGGCACAAGAACTGGTCCATTCCTTGCTCAACGCTGGTGATTCATTGGTTGTGGTTGATTTCTATTCACCTGGTTGTGGAGGCTGCAAAGCCCTTCATCCTAAGATCTGTCAAATAGCTGAATTGCACCCAAATGCAATCTTTCTTAAAGTCAACTACGAGGAACTGAAAACCATGTGTCACGGTTTGCGAATTCACGTGTTACCCTTCTTCAGATTCTATAGAGGTGCGGAGGGTCGAGTTTCTAGCTTCAGCTGTACCAATGCCACTATCAAGAAATTTAAGGATGCTTTGACAAAGCATGGGAATGAACGGTGTAGTTTAGGTCCAGCAAAAGGTTTGGAAGAATCCGAGTTGAAAATTTTGGCTTCTATTGGTGAAATTAATTCTTCTCCGTTACTAAGTCCCAAGCAAGGGAAATTGGAAGATTTGCTTACGGAGAGCCATGATTTTGCTGGGGTTTGGAACATGGAAAATAATAGCAGGGGACTTATGCTGGATGCTATATACTAG 816 0.4216 MACSMNSVFCVPELNESIFGSKTKGVLLPCPSKTANAKSWGCSVLSNAFMGKSIALGEKGSGCCNSKFSSNVPVHAQATICVSKALKWWKKTLKPNMIEIHSAQELVHSLLNAGDSLVVVDFYSPGCGGCKALHPKICQIAELHPNAIFLKVNYEELKTMCHGLRIHVLPFFRFYRGAEGRVSSFSCTNATIKKFKDALTKHGNERCSLGPAKGLEESELKILASIGEINSSPLLSPKQGKLEDLLTESHDFAGVWNMENNSRGLMLDAIY* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1642 271 PANTHER THIOREDOXIN-LIKE 1-2, CHLOROPLASTIC 1 260 - -
Gso6g1642 271 Pfam Thioredoxin 109 188 IPR013766 -
Gso6g1642 271 PANTHER THIOREDOXIN, MITOCHONDRIAL 1 260 - -
Gso6g1642 271 Gene3D Glutaredoxin 88 204 - -
Gso6g1642 271 CDD TRX_family 113 199 - -
Gso6g1642 271 SUPERFAMILY Thioredoxin-like 88 203 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1642 Gso-Chr6 17461896 17463697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1642 - - gmx:100800129 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1642 6 17461896 17463697 Gso6g1642 6 17461896 17463697 ECH
Gso4g1408 4 41445831 41447671 Gso6g1642 6 17461896 17463697 GST