Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1617 ATGGCAGACTCCACCCCTCTCCTCTCCCAACCCGACTCATCATCATCTCCGGACACACAAAAACCACAACCACCACCACCGCCACGAAACCAACAGCATCCCTCTCTGGGGTCCACAGTCGAACTCTGCATAGGCGAGTTCAACTGGTCCCAGTTCCTCCAGTCGATCCTCGTCTCCCTCGCGTGGATCTTTGACGCCCAGCAGACCTTCATCAGCGTCTTCACCGACGCCCCGCCGGCGTGGCGCTGCACCGAGCAGGCCGGCAATGCATGCAAGACTGCCAACACCAACACAGTCTGCAACCTCCCAGAAGGCTCGTGGGCCTGGGACGGGCCCACACAGGCCTCCATGGTGTCGGACTGGGGCCTGGAGTGCGCCAACTCCTCCATCACGGGCCTTCCCGCTTCGATGTTCTTCGCTGGCTGTTTGCTTGGCGGCTTCCTGCTGGCCTCGCTGGCTGATTCGTCGCTCGGCCGCAAGAACATGCTGTTCTTCTCCTGCCTCGTCATGGCCATCACTTCCTTTCTCGTCACTTTTTCGCCCAACGTCTCCATCTATTCTGCCCTCAAGTTTCTCTGTGGCTTTGCTCGTGCTACCATTGGGACCTCCGCGCTTGTGCTGGCCTCGGAGCTCGTTGGGAGACGGTGGCGCGCCCAGATTAGCGTCATTGGCTTCTTTTGTTTTACTATAGGGTTCTTGTCCCTGCCAGCCATGGCTTACATAAACAGAAGTTCTTCATGGAGGAACCTTTATCTCTGGACATCCATCTCAACCATGCTCTACTGCATCCTTGTGAAGTTGTTCGTTACGGAGTCCCCAAGATGGCTTCTAGTGCGAGGAAAAACAGAAGAAGCCGTGGAAACACTAAAGTGCATCACATCAATCACCCAAAGCAACCTCAATTTGGCCATTAATAACATGTCCCACGAGGAAGAAACATGGAACGTGGACATCTTCTCAGCCCTCAAAATCTTGCTACAAAATAAATGGTCTTCGAGAAGGTTATCATCAATTATGGCAATGGGAATAGGCATTGGATTGGTGTATTATGGCATGCCACTAGGGCTCCAAAACCTCTCCTTCAACCTCTACTTGAGTGTCATATTCAACGCCTTATCCGAGTTACCATCAGCATTGATTGTGTTATTCTTCATAGACAAGTTCAACAGGAGAATCACACTCCTCCTCTTCACTATTTTAAGTGGTCTTTTCAGCGTGATGTCAACCGTGCAAGTGAGTAAATCATCATCATCATGGAACAACAACGTGCAAATAGTGTTTGAGTTAGTTTCGTTCTTTAGCGCTTGTACTTCGTTCAACGTGTACCTAATTTATACCACAGAGTTGTTCCCGACGTGTGTGAGGAACTCGGCGCTGTCGATGGCGAGGCTCGCGGTGGTGCTCGGTGGCATGTTCAGCCCGCTGCTGGTGAGTGCCGGAAGAGGGAACAAGTTTTTGTGTTATGGGGTTTTTGGGTTGGTGATAGGGTTTAGTGGGGTCTTTGGAATATTCTTGCCCGAGACAAAAGGGAGGGCATTCTGTGATTCAATGGATGAAGAAGAAAACAAAGAGAAAAACATGGCTTGTGGCATGTTGTTGGCTTGA 1605 0.5121 MADSTPLLSQPDSSSSPDTQKPQPPPPPRNQQHPSLGSTVELCIGEFNWSQFLQSILVSLAWIFDAQQTFISVFTDAPPAWRCTEQAGNACKTANTNTVCNLPEGSWAWDGPTQASMVSDWGLECANSSITGLPASMFFAGCLLGGFLLASLADSSLGRKNMLFFSCLVMAITSFLVTFSPNVSIYSALKFLCGFARATIGTSALVLASELVGRRWRAQISVIGFFCFTIGFLSLPAMAYINRSSSWRNLYLWTSISTMLYCILVKLFVTESPRWLLVRGKTEEAVETLKCITSITQSNLNLAINNMSHEEETWNVDIFSALKILLQNKWSSRRLSSIMAMGIGIGLVYYGMPLGLQNLSFNLYLSVIFNALSELPSALIVLFFIDKFNRRITLLLFTILSGLFSVMSTVQVSKSSSSWNNNVQIVFELVSFFSACTSFNVYLIYTTELFPTCVRNSALSMARLAVVLGGMFSPLLVSAGRGNKFLCYGVFGLVIGFSGVFGIFLPETKGRAFCDSMDEEENKEKNMACGMLLA* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1617 534 SUPERFAMILY MFS general substrate transporter 111 513 IPR036259 -
Gso6g1617 534 MobiDBLite consensus disorder prediction 1 35 - -
Gso6g1617 534 Pfam Sugar (and other) transporter 127 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Gso6g1617 534 Gene3D MFS general substrate transporter like domains 55 521 IPR036259 -
Gso6g1617 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 54 510 IPR020846 GO:0022857
Gso6g1617 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 30 526 - -
Gso6g1617 534 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 3 30 526 - -
Gso6g1617 534 MobiDBLite consensus disorder prediction 1 17 - -
Gso6g1617 534 ProSitePatterns Sugar transport proteins signature 1. 205 221 IPR005829 GO:0016021|GO:0022857|GO:0055085
Gso6g1617 534 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1617 Gso-Chr6 17014697 17017076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1617 1 523 Organic Solute Cotransporters AT1G16390 56.439 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1617 - - gmx:100809734 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso4g1437 4 42269140 42272053 Gso6g1617 6 17014697 17017076 GST