Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1611 ATGTTCAAAGTGTACCGGGTTTCATCTTTTCTCTTGTGGCTTCTGCTTCTTGCTCAAGCACATGGAAATGATAAGATAGGATTTTATCAACTCAAGAGAGGAAATTTACATCTGAATTTGACAAATTATGGTGCATCAGTTATCTCCGTTATTGTCCCTGATAAACATGGGAATTTAGGTGACATTACGCTTGGCTACGATGACATTGAGCAATACAAGAATGATTCATGGTACTTCGGAGCCACTATTGGACGTGTGGCAAATAGAATTGGACACGCTCAATTCACATTGGATGGTCATGCCTATAAATTGCCTGCTAATGATCACGGCAACACCCTCCACGGTGGTTTCACAGGGTTCAGTGATGTTGTATGGACAGTAAAAAGTCACAAGGAAGATGACCACGTAACATTTACCTATGACAGTTATGACCATGAACAAGGCTTCCCTGGAAGACTTGAAGTAAGTGTGACCTACATGGTCATTGGCACAAACAAATATTGTGTGAAAATGATTGCCAAGCCAATAGACAAAGCCACACCAGTGAACCTAGCGCATCATACATACTGGAATCTAAAGGGCCACAACGGTGGTGACATTCTATCCCACGAAGTTCAAATCTTTGGCTCAAAGATCACACCAGTGGATAAGAAACTCATCCCCACCGGAAAATTCGAATCCGTGAAGGGCACCCCATATGATTTCCTAGAACCAAGGGAAGTCGGTAGCCGAATCAATGACCTTCCTGGATTATATGACATGAACTACGTGCTTGATGCAAGTAGCCCTAATCACTTCAGAAAAGTGCTTATAGTGAGAGAAAAAGTCTCTGGGAGGAAGCTAGAGTTGTGGTCAAACCAAATTGGTCTTCAGTTCTACACCGGTGGCATGTTAAATGCTACAAAGGGTAAGGATGGAGCCATTTATCATAAGCATGGTGGTATGGCCTTGGAGACACAAGGGTTCCCTGATGCTGTGAATCATTCAAATTTCCCATCACAGATTGTGCGTCCTGGGGAGACATATAAGCACTACATGGTCTACAGATTCACGGCTAGCTGA 1062 0.4313 MFKVYRVSSFLLWLLLLAQAHGNDKIGFYQLKRGNLHLNLTNYGASVISVIVPDKHGNLGDITLGYDDIEQYKNDSWYFGATIGRVANRIGHAQFTLDGHAYKLPANDHGNTLHGGFTGFSDVVWTVKSHKEDDHVTFTYDSYDHEQGFPGRLEVSVTYMVIGTNKYCVKMIAKPIDKATPVNLAHHTYWNLKGHNGGDILSHEVQIFGSKITPVDKKLIPTGKFESVKGTPYDFLEPREVGSRINDLPGLYDMNYVLDASSPNHFRKVLIVREKVSGRKLELWSNQIGLQFYTGGMLNATKGKDGAIYHKHGGMALETQGFPDAVNHSNFPSQIVRPGETYKHYMVYRFTAS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1611 353 CDD galactose_mutarotase_like 40 350 - -
Gso6g1611 353 PIRSF GALM 16 353 IPR015443 GO:0016853|GO:0019318
Gso6g1611 353 Gene3D - 18 352 IPR014718 GO:0030246
Gso6g1611 353 SUPERFAMILY Galactose mutarotase-like 17 350 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gso6g1611 353 PANTHER ALDOSE 1-EPIMERASE 4 353 - -
Gso6g1611 353 PANTHER ALDOSE-1-EPIMERASE 4 353 - -
Gso6g1611 353 Pfam Aldose 1-epimerase 29 349 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1611 Gso-Chr6 16900008 16902047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1611 9 352 Miscellaneous Gene Families AT3G47800 58.721 3.10e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1611 K01785 - gmx:100807070 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1611 6 16900008 16902047 Gso6g1611 6 16900008 16902047 ECH