Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso6g1577 ATGAAGAATTATAGAATTAGGGACAACATGGCTGGAGGATCACTTGGAGACAACATTGGATTGAAGGAAGATGCTATCAAGAGGGTGTGTGGTTTGGCCTGCAAAGCTAACAATCACAAGTCAACGGATAAGCTCTACTTTTACGACAAGGTTCAGATTTCTTCGGAAACTTACCATGTTTTCAGCTTCCCGGGATCTTGGGATCCCGCTGAATGGTTTGTTAACAAACCCTTTGGGGTATCGAAGATAAATTCTACCCAGTTCCCTTCTCTCAGAAGTATTGGTAACGATGAACTTGCTTGGGTGAACGAAGGCTTCGCAAAGAGATTCGATCGCCTATTGGAAACTAACTTTGAAGATGTGGTGAAGAAGGCTATACTAGATGGGAAGCAAGTAGTGTTTACAGGGCACTCCTCTGGTGCTGCAATGGCAACTCAAACTACCTTTTGGGTCTTGGAAAAGTACTTTAACCCAACAAAAATCCAAAAACCCAAGCTACCCTTTTGTGTCACTTTTGGGTCTCCCTTAATTGGCAATCATATATTCTCTCACGCTTCAAAGAGAGAAAATTGGTCACGCTATTTCGTACACTTTGTTTTGAGATATGACATAGTGCCAAGGATTTTGCTTGCTCCCTTGGCTTCTATTGAGGAAAATTTTGGTTCTGTTCTCCAATTCTTGAATCCCAAGTCCAAAACTTCCACCCAAGATCCAACAAGGGCTATTTTGATTTCTGAAGTTTATAAAACTGTGATGAGAAACGCCGCGAGTGTTACAAGCCATGCTGCTTGTATTCTCATGGGCAGCACAAATTTGTTACTTGAGACAGTGGCAAATTTTGTTGAGTTGAGCCCTTATAGGCCCTTTGGAACATATGTTTTCTGCAACGGAAATGGACAGCTGATTGTGGTGGAAAACTCAGATGCTGTTTTGCAACTCTTGTTCCACACTGCCCTGTTAAGCGATTTGGCAGAACTTGAAGAAGTTGCCGACAAAAGCATATCGCAACACCTGAACTATGTGGCTGAGTTGCAGGAAAGCTTGGGAATGCAGAATGTAGTGTACTTGGAGCAACTTGAGCAACTTCCCTTGTCTGCTGACGGTTCAAATAGTGATGTTGCAACAGCCTTGGATGGCCTTGGACTGAACACAAGAGCAAGGCTGTGTCTACGAGCAGCTGGTGAGTTGGAGAAGCAGAAACGCAAAAACGAGGACAAAATCATGAAGGAGATTCAGGATAAAGCCTTGACAAGCATGAAAGAGCTTCAAAATTACAAAACAACATGTGAGATGCACAAGGGGAAGGGCTATTACGATGCCTTCAAGGTGCAAAAGGAGTCGAACGACTTCCAAGCAAACGTGAAGAGGCTTGTGCTAGCAGGGGTATGGGATGAAGTCATTGAGATGCTAAAGAGGTATGAACTCCCTGATGAGTTCGAAGGGGACAAAGAATGGATAAAGCGTGGAACCGAATATCGCCGCCTTGTGGAGCCTCTAGACATTGCAAACTATTACCGCCACTTGAAGAATGAGGACACAGGACCTTACATGATCAGGGCCAGGCCAAAACGGTATAGGTACACTCAAAGATGGTTGGAACATGCTAAAAGGATGCCACCTGCTCCTATCACTGAATCAACCTTTTGGGCTGAAGTGGAGGAACTTTATAGCTGGATTAACAGCAAGAAGCCTCTTGATGATCATGTCGAGCAAAGGGTTAAGCAGCTTCAAAAAGACCTTAAAAATTGGACTGATGATGAGAAAGTACTAGCCAAGGATACGTTCTTGAAGGATCCTAACTTTATTAGGTGGAAGGATATTCTACCTCAGGAACTCAAGGACACTTCTTCCTAG 1854 0.4369 MKNYRIRDNMAGGSLGDNIGLKEDAIKRVCGLACKANNHKSTDKLYFYDKVQISSETYHVFSFPGSWDPAEWFVNKPFGVSKINSTQFPSLRSIGNDELAWVNEGFAKRFDRLLETNFEDVVKKAILDGKQVVFTGHSSGAAMATQTTFWVLEKYFNPTKIQKPKLPFCVTFGSPLIGNHIFSHASKRENWSRYFVHFVLRYDIVPRILLAPLASIEENFGSVLQFLNPKSKTSTQDPTRAILISEVYKTVMRNAASVTSHAACILMGSTNLLLETVANFVELSPYRPFGTYVFCNGNGQLIVVENSDAVLQLLFHTALLSDLAELEEVADKSISQHLNYVAELQESLGMQNVVYLEQLEQLPLSADGSNSDVATALDGLGLNTRARLCLRAAGELEKQKRKNEDKIMKEIQDKALTSMKELQNYKTTCEMHKGKGYYDAFKVQKESNDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGDKEWIKRGTEYRRLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYTQRWLEHAKRMPPAPITESTFWAEVEELYSWINSKKPLDDHVEQRVKQLQKDLKNWTDDEKVLAKDTFLKDPNFIRWKDILPQELKDTSS* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso6g1577 617 Pfam Lipase (class 3) 60 208 IPR002921 GO:0006629
Gso6g1577 617 Gene3D alpha/beta hydrolase 23 264 IPR029058 -
Gso6g1577 617 PANTHER PROTEIN EDS1-RELATED 10 617 IPR044214 GO:0006952
Gso6g1577 617 Pfam Enhanced disease susceptibility 1 protein EP domain 420 604 IPR041266 -
Gso6g1577 617 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 10 617 - -
Gso6g1577 617 SUPERFAMILY alpha/beta-Hydrolases 54 212 IPR029058 -
Gso6g1577 617 Coils Coil 566 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso6g1577 Gso-Chr6 16356560 16359830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso6g1577 130 209 Acyl Lipid Metabolism Gene Families AT3G07400 30.864 1.16e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso6g1577 K18875 - gmx:100775870 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso6g1577 6 16356560 16359830 Gso6g1577 6 16356560 16359830 ECH